Pairwise Alignments

Query, 1034 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

Subject, 1029 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  837 bits (2162), Expect = 0.0
 Identities = 454/1022 (44%), Positives = 664/1022 (64%), Gaps = 17/1022 (1%)

Query: 4    SAPFIARPVATMLLSLAILLLGGVSFGLLPVSPLPNMDFPVITVQASLPGASPEIMASSV 63
            SA  +  PVAT+LL+ A++LLG ++F  L ++PLP  +FP I V A+LPGASP+ MASSV
Sbjct: 6    SAWCVDHPVATLLLTFALVLLGLIAFPRLAIAPLPEAEFPTIQVTATLPGASPDTMASSV 65

Query: 64   ATPLERSLGSIAGVSQMTSRSSQGSTRIIIQFDLDRDINGAARDVQAAINASRNLLPSGM 123
            ATPLE    +I G++QMTS S+ GS+ + +QF L + I+ AA++VQAAIN +   LPS M
Sbjct: 66   ATPLEVQFSAIPGMTQMTSSSALGSSLLTLQFTLTKSIDTAAQEVQAAINTASGKLPSDM 125

Query: 124  RSMPTYRKINPSQAPIMVLSLTSEVLDKAELYDIGSTILAQKLSQVSGVGEIQVGGSSLP 183
             S+PT++K+NP+ +P+++LS++S  +   EL D   T+LA+++SQ+ GVG+I + G   P
Sbjct: 126  PSLPTWKKVNPADSPVLILSVSSNSMPSTELSDYVETLLARQISQIDGVGQINITGQQRP 185

Query: 184  AVRVELQPQQLEQYGVSLDEVRQTIANGNVRRPKGMVEDADQHWQVRANDQLHQAADYTP 243
            A+RV+  P +L   G++L ++R  I   ++   KG +   +    +  NDQL    DY  
Sbjct: 186  AIRVQASPDKLAAIGLTLADIRLAIQQSSLNLAKGAIYGENSVSTLSTNDQLFHPEDYAQ 245

Query: 244  LIIRYQDGAALRLGDVARVRDSVEDRYNSGFFNNEQAVLLIVNRQAGANIIETIEGIRRE 303
            LI+ Y+DGA ++L D+A+V +  E+ Y   +  +   V L+++RQ GANI+ET++ I+ E
Sbjct: 246  LIVSYKDGAPVQLRDIAKVINGSENAYVQAWAGDTPGVNLVISRQPGANIVETVDRIQAE 305

Query: 304  LPALQAIMPGSVDLNIAMDRSPVIRATLHEAERTLLIAVGLVIVLVFLFLGRLRTALIPA 363
            LP LQA++P SV +++  DR+  IRA+LHE E TLLIA+ LV+ ++ LFL +L   +I +
Sbjct: 306  LPRLQAMLPASVQVSVLTDRTKTIRASLHEVEVTLLIAILLVVAVMALFLRQLSATMIVS 365

Query: 364  LAVPVSLVGTFAVMYMFGFSLNVLSLMALILAAGLVVDDAIVVLENIARHIDDGMPPLKA 423
              + VSLV +FA+MY+ GFSLN L+L+A+++A G VVDDAIVV+ENI RH++ G+   +A
Sbjct: 366  SVLGVSLVASFALMYLMGFSLNNLTLVAIVIAVGFVVDDAIVVVENIHRHLEAGLDKREA 425

Query: 424  AYVGTREVGFTLLSMNLSLVVVFVSILYMGGIVERLFREFSITLAAAILVSLLVSLTLTP 483
            A  G  E+GFT++S++ SLV  F+ +L+MGG+V RLF+EF++T  + IL+S++VSLTL P
Sbjct: 426  AIKGAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLTLAP 485

Query: 484  MLCARWLKP---HEPEKEGRLQRWSHDAHQWLLRYYDRSLSWALRHRRITLLSLLATIAL 540
             L A +++    H  +K G  +R        LL  Y R+L  AL H+R      + T+AL
Sbjct: 486  TLAALFMRAPTHHAHDKPGFSER--------LLAGYARNLRRALAHQRTMAAIFVVTLAL 537

Query: 541  NVVLYVQVPKTFLPQQDTGQITGFIRGDDGMSFQVMQPKMEIFRKAVLADPAVESVAGFI 600
             VV YV +PK F P QDTG + G       +S+  M  K +   + V ADPAV + +  +
Sbjct: 538  AVVGYVFIPKGFFPVQDTGFVLGTSEAAADVSYPDMVAKHKALAEIVKADPAVAAFSHSV 597

Query: 601  GGQGG---INNAFMIVRLKPLNERGISAQKVIERIRKNQPKVPGGRMFLMADQDLQFGGG 657
            G  G    I N    + LK   +R +SA + I+RIR    KVPG  ++L A QD+    G
Sbjct: 598  GVTGSNQTIANGRFWIALKDRGDRDVSASQFIDRIRPKLAKVPGIVLYLRAGQDINLSSG 657

Query: 658  RQSSSAYAYTLLASDLNDLRTWVPQVTRALSDLPELTSIDANDGEGAQQISLKIDRDAAK 717
              S + Y Y L ++D   L TW  ++T  L   P    +  +   G     + IDR AA 
Sbjct: 658  -PSRAQYQYVLKSNDGPTLNTWTQRLTEKLRANPAFRDLSNDLQLGGSITHISIDRQAAA 716

Query: 718  RLGIDMSTVTTLLNNAFSQRQISTIYESLNQYQVVMEIDPSYAQYPEVLEQIHVVTS-DG 776
            R G+  + V   L +AF QRQI+     +NQYQVV+E+D       E L   ++ +    
Sbjct: 717  RFGLTATDVDQALYDAFGQRQINEFQTEINQYQVVLELDTQQRGKAESLNYFYLRSPLTN 776

Query: 777  RRVPLAAFARYE-RSLEEDRVSHDGQFAAENIDFDLAPGVSLDQATLAIERAVAAIGMPS 835
              VPL+A A+ +  ++    +SHDG F A N+ F+LAPGV+L  A + + +A   IGMP+
Sbjct: 777  EMVPLSALAKVDPPTVGPLSISHDGMFPAANLSFNLAPGVALGDAVIMLNQAKNEIGMPT 836

Query: 836  EVQGRLGGTGSAFQTTQEGQPLMILGALLLVYIVLGILYESYIHPLTILSTLPSAGVGAL 895
             + G   G   AFQ++   QP +IL AL+ VYI+LG+LYES++HPLTI+STLPSAG+GAL
Sbjct: 837  TLIGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGAL 896

Query: 896  LAIILTGDQFSLISLLGLFLLIGVVKKNAILMIDLALQFERQDKLSPADSIHRACLLRFR 955
            + + L G  FS+++L+GL LLIG+VKKN ILMID AL+ +R   LSP D+I+ AC+ RFR
Sbjct: 897  IMLSLMGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRVRGLSPEDAIYEACVTRFR 956

Query: 956  PILMTTMAAILGALPLLLGGAEGAEMRQPLGLTIIGGLLLSQILTLYTTPVVYLYLDRLR 1015
            PI+MTT+AA+LGA+PL+LG   GAEMRQPLG+ ++GGLL+SQ LTL+TTPV+YLYL++  
Sbjct: 957  PIIMTTLAALLGAVPLMLGTGPGAEMRQPLGIAVVGGLLVSQALTLFTTPVIYLYLEKFF 1016

Query: 1016 HR 1017
            H+
Sbjct: 1017 HK 1018