Pairwise Alignments

Query, 1034 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

Subject, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score = 1503 bits (3892), Expect = 0.0
 Identities = 769/1036 (74%), Positives = 887/1036 (85%), Gaps = 3/1036 (0%)

Query: 1    MNLSAPFIARPVATMLLSLAILLLGGVSFGLLPVSPLPNMDFPVITVQASLPGASPEIMA 60
            MNLS PFI RPVATMLLSLAI+LLGGVSFGLLPV+PLP MDFPVI V A+L GASPE+MA
Sbjct: 1    MNLSGPFIRRPVATMLLSLAIMLLGGVSFGLLPVAPLPQMDFPVIVVSANLSGASPEVMA 60

Query: 61   SSVATPLERSLGSIAGVSQMTSRSSQGSTRIIIQFDLDRDINGAARDVQAAINASRNLLP 120
            S+VATPLER LGSIAGV+ +TS S+QGSTR++I F+L RDI+GAAR+VQAAINA+RNLLP
Sbjct: 61   STVATPLERKLGSIAGVTTLTSSSNQGSTRVVIGFELGRDIDGAAREVQAAINATRNLLP 120

Query: 121  SGMRSMPTYRKINPSQAPIMVLSLTSEVLDKAELYDIGSTILAQKLSQVSGVGEIQVGGS 180
            SGMRSMPTY+KINPSQAPIMVLSLTS+VL K +LYD+  TIL+Q L+QVSGVGE+Q+GGS
Sbjct: 121  SGMRSMPTYKKINPSQAPIMVLSLTSDVLQKGQLYDLADTILSQSLAQVSGVGEVQIGGS 180

Query: 181  SLPAVRVELQPQQLEQYGVSLDEVRQTIANGNVRRPKGMVEDADQHWQVRANDQLHQAAD 240
            SLPAVR+ ++PQ L QY +SLDEVR  ++N N RRP G VEDA+++WQVRANDQL  A D
Sbjct: 181  SLPAVRIAVEPQLLNQYNLSLDEVRTAVSNANQRRPMGFVEDAERNWQVRANDQLESAKD 240

Query: 241  YTPLIIRYQDGAALRLGDVARVRDSVEDRYNSGFFNNEQAVLLIVNRQAGANIIETIEGI 300
            Y P++IR Q+G  LRL DVA V D VE+RYNSGFFN++ AVLL+VNRQ GANIIET++ I
Sbjct: 241  YEPVVIRQQNGTILRLSDVATVTDGVENRYNSGFFNDQAAVLLVVNRQTGANIIETVDQI 300

Query: 301  RRELPALQAIMPGSVDLNIAMDRSPVIRATLHEAERTLLIAVGLVIVLVFLFLGRLRTAL 360
            + +LPALQ+++P SV LN+AMDRSPVI+ATL EAE TLLIAV LVI++V+LFLG LR +L
Sbjct: 301  KAQLPALQSLLPASVQLNVAMDRSPVIKATLKEAEHTLLIAVVLVILVVYLFLGSLRASL 360

Query: 361  IPALAVPVSLVGTFAVMYMFGFSLNVLSLMALILAAGLVVDDAIVVLENIARHIDDGMPP 420
            IP+LAVPVSLVGTFAVMY+ GFSLN LSLMALILA GLVVDDAIVVLENI+RHI++G PP
Sbjct: 361  IPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVDDAIVVLENISRHIENGQPP 420

Query: 421  LKAAYVGTREVGFTLLSMNLSLVVVFVSILYMGGIVERLFREFSITLAAAILVSLLVSLT 480
            +KAA++G +EVGFTLLSMN+SLV VFVSIL+MGGIV  LF+EFSITLAAAI+VSL+VSLT
Sbjct: 421  MKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQEFSITLAAAIIVSLVVSLT 480

Query: 481  LTPMLCARWLKPHEPEKEGRLQRWSHDAHQWLLRYYDRSLSWALRHRRITLLSLLATIAL 540
            LTPMLCARWLKP + E + RLQRWS   HQ ++  YD SL WALRH+R+TLLSLLATI +
Sbjct: 481  LTPMLCARWLKPQQAE-QTRLQRWSDTLHQRMVAAYDHSLGWALRHKRLTLLSLLATIGI 539

Query: 541  NVVLYVQVPKTFLPQQDTGQITGFIRGDDGMSFQVMQPKMEIFRKAVLADPAVESVAGFI 600
            N+ LYV VPKT +PQQDTGQ+ GFIRGDDG+SF VMQPKMEI+R+A+LADPAV+SVAGFI
Sbjct: 540  NIALYVVVPKTLMPQQDTGQLMGFIRGDDGLSFTVMQPKMEIYRRALLADPAVQSVAGFI 599

Query: 601  GGQGGINNAFMIVRLKPLNERGISAQKVIERIRKNQPKVPGGRMFLMADQDLQFGGG--R 658
            GG  G NNAF++VRLKP++ER I AQKVIER+RK  PKVPGGR+FLMADQDLQ GGG   
Sbjct: 600  GGNSGTNNAFVLVRLKPISERKIDAQKVIERLRKELPKVPGGRLFLMADQDLQLGGGGRD 659

Query: 659  QSSSAYAYTLLASDLNDLRTWVPQVTRALSDLPELTSIDANDGEGAQQISLKIDRDAAKR 718
            Q+SS Y YTL + DL  LR W P+V  AL  LPELT+IDA DG G QQ++L +DRD AKR
Sbjct: 660  QTSSQYLYTLQSGDLAALREWFPKVVAALRALPELTAIDARDGAGTQQVTLVVDRDQAKR 719

Query: 719  LGIDMSTVTTLLNNAFSQRQISTIYESLNQYQVVMEIDPSYAQYPEVLEQIHVVTSDGRR 778
            LGIDM  VT +LNNA+SQRQISTIY+SLNQYQVV+EI+P YA  P  LEQ+ V+T+DG R
Sbjct: 720  LGIDMDMVTAVLNNAYSQRQISTIYDSLNQYQVVLEINPKYAWDPSTLEQVQVITADGAR 779

Query: 779  VPLAAFARYERSLEEDRVSHDGQFAAENIDFDLAPGVSLDQATLAIERAVAAIGMPSEVQ 838
            VPL+  A YE SL  DRVSH+GQFA+E+I FD+A G S DQA  A+ERAVA +G+P EV 
Sbjct: 780  VPLSTIAHYENSLANDRVSHEGQFASEDIAFDVAEGYSPDQAMAALERAVAKLGLPEEVI 839

Query: 839  GRLGGTGSAFQTTQEGQPLMILGALLLVYIVLGILYESYIHPLTILSTLPSAGVGALLAI 898
             +LGGT  AF  TQ+GQP MILGALLLVY+VLGILYESYIHPLTILSTLPSAGVGALLA+
Sbjct: 840  AKLGGTADAFAQTQQGQPFMILGALLLVYLVLGILYESYIHPLTILSTLPSAGVGALLAL 899

Query: 899  ILTGDQFSLISLLGLFLLIGVVKKNAILMIDLALQFERQDKLSPADSIHRACLLRFRPIL 958
             +TG +FSLISLLGLFLLIGVVKKNAILMIDLALQ ER    SP +SI RACLLR RPIL
Sbjct: 900  YVTGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGFSPEESIRRACLLRLRPIL 959

Query: 959  MTTMAAILGALPLLLGGAEGAEMRQPLGLTIIGGLLLSQILTLYTTPVVYLYLDRLRHRF 1018
            MTT+AAILGALPLLL  AEGAEMRQPLGLTIIGGL+ SQILTLYTTPVVYLYLDRLRHRF
Sbjct: 960  MTTLAAILGALPLLLSQAEGAEMRQPLGLTIIGGLVFSQILTLYTTPVVYLYLDRLRHRF 1019

Query: 1019 NSWRGVRTDAALENSL 1034
            N WRGVRTDAALE  L
Sbjct: 1020 NRWRGVRTDAALETPL 1035