Pairwise Alignments

Query, 1026 a.a., Cation/multidrug efflux pump from Pseudomonas stutzeri RCH2

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score = 1571 bits (4067), Expect = 0.0
 Identities = 815/1020 (79%), Positives = 927/1020 (90%), Gaps = 7/1020 (0%)

Query: 1    MNISRLFILRPVATTLSMVAILLAGLIAYKLLPVAALPQVDYPTIRVMTLYPGASPEVMT 60
            MN+SRLFILRPVATTLSM+AI+LAGLIAYKLLPV+ALPQVDYPTIRVMTLYPGASP+VMT
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 61   SAVTAPLERQFGQMPGLAQMSSTSSGGASVITLRFSLDVALDVAEQEVQAAINGANNLLP 120
            SAVTAPLERQFGQMPGL QM+STSSGGASV+TLRF+LD+ +DVAEQ+VQAAIN A+NLLP
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 121  NDLPAPPVYNKVNPADTPVLTLAVTSESLPLPKLHDLVDTRMAQKLAQINGVGMVSIAGG 180
            +DLPAPPVYNKVNPADTPVLTLA++S+++PLPKL+DLVDTR+AQKLAQI+GVGMVSIAGG
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 181  QRPAVRIRTNPEALAAYGLSLADVRSLITSSNVNQPKGNFDGPTRVSMLDANDQLKTPEE 240
            QR AVRI+ N +ALAA GL+L DVR+LI +SNVNQPKGNFDGPTRVSMLDANDQL++PEE
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 241  YAELILTYQDGAALRLKDVADIVDGAENERLAAWANESQAVLLNVQRQPGANVIDVVERI 300
            YA LIL Y +GA LRLKDVA+IVDGAENERLAAWANE+ AVLLN+QRQPGANVI+VV+RI
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 301  QALLPEVTASMPAGLDVVVLTDRTQTIRAAVTDVQHELMLATFLVVMVTFVFLKKLSATV 360
            + LLP +T ++PAGLDV VLTDRTQTIRAAV DVQHEL++A  LVVMVTFVFL++ SAT+
Sbjct: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360

Query: 361  IPSIAVPLSLVGTFAVMYVCGFSLNNLTLMALTIATGFVVDDAIVMLENIARHLEEGETP 420
            IPSIAVPLSL+GTF VMY+ GFS+NNLTLMALTIATGFVVDDAIVMLENI+RH+EEGETP
Sbjct: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420

Query: 421  LNAALKGARQIGFTLISLTFSLIAVLIPLLFMQDVVGRLFREFAITLAVAILISLVVSLT 480
            + AALKGARQIGFTLISLTFSLIAVLIPLLFM DVVGRLFREFAITLAVAILISLVVSLT
Sbjct: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMMCAKLLKPHSVAE-------AKPDWVERLIGGYSRWLTWVLRHQTLTLLVAVATLG 533
            LTPMMCA+LLK     E       A   W++ LI  Y   L WVL+HQ LTLLVAVA+L 
Sbjct: 481  LTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLV 540

Query: 534  LTVVLYLAVPKGFFPVQDTGVIQGISEAPQSISFRAMSERQQALARVILADPSVQSLSSY 593
            LTV LY+ VPKGFFPVQDTGVIQGISEAPQS SF AMSERQQAL++VIL DP+VQSLSSY
Sbjct: 541  LTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSY 600

Query: 594  IGVDGDNVTLNSGRLLINLKPHGERDLTASQIIDRLRPELAKVPGIELYLQPVQDLSIED 653
            IGVDGDN TLNSGRLLINLKPHGERD++AS++I RL+P++ ++ GI L++QPVQDLSIED
Sbjct: 601  IGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIED 660

Query: 654  RVSRTQFQFSLETPDSELLQEWTPRLVEALRERPELTDVASDLQSNGLQIYLDIDRDAAA 713
            RVSRTQ+QFSL +PD++LL +W+ +LV+AL++RPEL DVASDLQ  GLQ+YL IDRD A+
Sbjct: 661  RVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMAS 720

Query: 714  RLGIQVADITDALYDAFGQRQISTIFTQASQYRVVLEAEAGNRLGPQALEQLFVQSEGGT 773
            RLGI V+ IT+ALYDAFGQRQISTI+TQASQYRVVL++     +GPQALE + V++  G 
Sbjct: 721  RLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDGG 780

Query: 774  PVRLSSLATFEQRNAPLLINHIGQFPAVTLSFNLASGVSLGKAVEVIEAVEQQIGLPAGI 833
             VRLS+LA  EQR A L I+HIGQFPAVTLSFNLA G SLG+AV+VIE V++ IG+P G+
Sbjct: 781  QVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGV 840

Query: 834  QTRFQGAAEAFRASLSSTLLLIFAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 893
            QTRFQGAAEAF+ASLSSTLLLI AAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA
Sbjct: 841  QTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 900

Query: 894  LLLTGNDLGLIAIIGIILLIGIVKKNAIMMIDFALEAERHQGMSPQDAIYRAALLRFRPI 953
            LL++GNDLG+IAIIGIILLIGIVKKNAIMMIDFALEAER+QGMSP+DAIY+AALLRFRPI
Sbjct: 901  LLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPI 960

Query: 954  LMTTLAALFGAIPLMLASGSGAELRQPLGLVLVGGLLLSQLLTLFTTPVIYLFFDRLGQR 1013
            LMTTLAALFGA+PLMLA+GSGAELRQPLGLV+VGGLL+SQ+LTLFTTPVIYL+FDRL +R
Sbjct: 961  LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLARR 1020