Pairwise Alignments

Query, 604 a.a., Outer membrane protein from Pseudomonas stutzeri RCH2

Subject, 633 a.a., Outer membrane component of TAM transport system from Sphingobium sp. HT1-2

 Score =  122 bits (306), Expect = 5e-32
 Identities = 135/524 (25%), Positives = 215/524 (41%), Gaps = 27/524 (5%)

Query: 98  EKALQALGYYRSRIRTDVRE---GDEPTLVLRVQTGEPVRLRNITVRLDGPAAEFSGFRV 154
           ++ L+A GYY +R+R  V     G +   V+   T  P+ + + TV + G  AE      
Sbjct: 114 DRLLRADGYYAARVRGSVAPPPAGSDKLSVIFDVTPGPLYVLD-TVEIAG-LAETGPREE 171

Query: 155 AQR---TLRQGDVLNHGRYEDVKQQFLNQASRYGYFDGRFTRQRLAVDPRENTADVELVF 211
             R   T++ GD +N  R    +          GY   R     + +D      D++++ 
Sbjct: 172 TLRGAFTMKSGDPINADRILAGQTALATALGENGYPFARVDEPEVRIDHEARNGDLDIIV 231

Query: 212 DSGPRYRLGDVRFEGDAPFDDDLLRRMVPFDADTPYDSELIAELSQALQSSGYFEGVRVD 271
             G     G +  + D  F    L+RM  F+    Y +  + +L +A+ ++G    V + 
Sbjct: 232 TPGGYRSFGQILLDNDDVFSARHLQRMARFEPGETYRATDVEDLRRAIVTTGLVSSVTL- 290

Query: 272 ANPTSASE-QRIPVAVALTTRKPRTFGLGLGYSTDVGPRVRLNWTRHWVNPQGHSYGAET 330
             P  A + + + + V L     RT    LGY T  G R  ++W    + P   S     
Sbjct: 291 -TPKDAGDGEHVDLDVDLRPAPMRTIAGELGYGTGEGYRAEVSWQHRNLFPPEGSLTLRG 349

Query: 331 ELSAPRQNVGLWYDI----PLDPPLTDKLRFVGGYQYEEIAGTDTLSRLLKVGPEWHSRL 386
            L    Q     Y        D  LT  + +    +    A T TLS  L+   + +   
Sbjct: 350 VLGTQEQTAQATYRRNNFRERDHVLTGLVSYSNIRRDAYDARTITLSGGLE--RQTNILF 407

Query: 387 PSGWL-RVVSLKWQHEEYKLGDDSGISTLLMPGIAYS--YLRSDNRIDPSNGYRLQFEVA 443
              W+ RV +     +E          T L+  +  S  Y  SD+ ++PS G+RL   ++
Sbjct: 408 QKHWVWRVGAELIASDEADAFSGGSRRTFLIGAVPLSLTYDGSDDLLNPSKGFRLGGRLS 467

Query: 444 AAKSGVLSDADLVHANVLLRGLTTLGQRHRFLGRVQLGGNWTDEYVNVPPSLRYFAGGDQ 503
              S   S      A V       +  R    GR +LG         + PS R++AGG  
Sbjct: 468 PELSFQGSTFGYAKAQVDASAYQPINDRVVLAGRTRLGTILGSTVDRIAPSRRFYAGGGA 527

Query: 504 SVRGYDYQSLSPT-NSDGDKIGGRYQFAVSAEYQYSIAEKWRVATFVDQGNAFNSL--EI 560
           SVRGY YQ++ P    D D +GG+     SAE +      + V  F+D GN   +     
Sbjct: 528 SVRGYGYQAIGPRYGPDDDPVGGKSLIEFSAEARIRFG-NFGVVPFLDAGNISTTFLPRF 586

Query: 561 PTLKSAVGVGVRWVSPVGPIRVDLAHPLDSEGG---VRLHFSMG 601
             L+   G+GVR+ S  GPIRVD+  P++ + G   V ++ S+G
Sbjct: 587 RDLRVGTGLGVRYYSSFGPIRVDVGTPINPQPGDAKVAVYVSLG 630