Pairwise Alignments

Query, 604 a.a., Outer membrane protein from Pseudomonas stutzeri RCH2

Subject, 918 a.a., Outer membrane protein assembly factor BamA from Acinetobacter radioresistens SK82

 Score =  199 bits (507), Expect = 3e-55
 Identities = 134/392 (34%), Positives = 204/392 (52%), Gaps = 38/392 (9%)

Query: 243 ADTPYDSELIAELSQALQSSGYFEGVRVDANPTSASEQRIPVAVALTTRKPRTFGLGLGY 302
           A T  D + ++   +  Q     E  +      + +E+ IPV + L      +   G+GY
Sbjct: 535 AGTQPDIQQVSLAREQQQVQDEREAQQEQLREQARAERSIPVLITLNADSLNSVETGIGY 594

Query: 303 STDVGPRVRLNWTRHWVNPQGHSYGAETELSAPRQNVGLWYDIPLDPPLTDKLRFVGGYQ 362
            +D G R+R  + R  VN +GH++ +  E+S  RQ +   Y IP + P  D +  VGGY+
Sbjct: 595 GSDTGARLRTQYRRAIVNRRGHAFDSNLEVSKIRQALDGRYTIPYNHPTDDYINLVGGYE 654

Query: 363 YEEIAGTDTLSRLLKVGPEWHSRLPSGWLRVVSL---KWQH---EEYKLG---------D 407
            EE    + + + L +  E      +G  R++     +WQH     Y+L           
Sbjct: 655 REE---REDVGKGLNLDIE---SAVAGIDRIIKNPRGQWQHTFGARYRLDRLNQRGNIVS 708

Query: 408 DSGISTLLMPG-------IAYSY----LRSDNRIDPSNGYRLQFEVAAAKSGVLSDADLV 456
           DS      +PG       + + Y    L SD R++P+ G+R  ++V      +LSDAD+ 
Sbjct: 709 DSIPDAFQIPGSNPEQQSLLFGYETSRLDSDARVNPTRGFRQTYKVELGSKTLLSDADMA 768

Query: 457 HANVLLRGLTTLGQR--HRFLGRVQLGGNWTDEYVNVPPSLRYFAGGDQSVRGYDYQSLS 514
             N   R + +LG+   H+F+GR  +G  +T+++  VP ++RYF GGDQS+RG+DY+SLS
Sbjct: 769 LVNAGWRFIYSLGENNDHQFVGRADVGYIFTEDFDQVPYNIRYFTGGDQSIRGFDYKSLS 828

Query: 515 PTNSDGDKIGGRYQFAVSAEYQYSIAEKWRVATFVDQGNAFN-SLEIPTLKSAVGVGVRW 573
           P    G K+GG+     S EY Y   + WR A F D GNA++     PT  SA G+G+RW
Sbjct: 829 P-EVFGYKVGGQALATTSLEYNYQFKDGWRAAVFADAGNAYDKDFNTPTAYSA-GLGIRW 886

Query: 574 VSPVGPIRVDLAHPL-DSEGGVRLHFSMGPEL 604
            SPVGPIR+D+A  L D    +RLHF +GP+L
Sbjct: 887 SSPVGPIRLDVAAGLSDDNIPIRLHFFIGPQL 918



 Score = 96.7 bits (239), Expect = 4e-24
 Identities = 60/183 (32%), Positives = 95/183 (51%), Gaps = 9/183 (4%)

Query: 97  AEKALQALGYYRSRIRTDVREGDEPTLVLRVQTGEPVRLRNITVRLDGPAAEFSGFRVAQ 156
           + +A QA+GYY S  R D  +  +  + + VQ  EPVR+    + + G  +E   F+V +
Sbjct: 299 SNQAAQAVGYYNSTFRFD--KVSDSRVRVYVQPNEPVRITEQDIEISGEGSEQPQFQVIE 356

Query: 157 RTLRQ--GDVLNHGRYEDVKQQFLNQASRYGYFDGRFTRQRLAVDPRENTADVELVFDSG 214
               Q  GD+ +HG YE+ K++  + AS  GYFD  +    + +   +NTA++ L +++G
Sbjct: 357 LIPDQDVGDIFHHGLYEETKRRITDAASNNGYFDAYWRLHDVKISQPQNTAEINLRYETG 416

Query: 215 PRYRLGDVRFE-----GDAPFDDDLLRRMVPFDADTPYDSELIAELSQALQSSGYFEGVR 269
            RY L    F+        P DDD+L+ MVP+     Y S  I  L+  L ++ YF    
Sbjct: 417 DRYSLKKPVFQMSDPSKPFPLDDDILQSMVPWKEGDDYTSWRINTLANNLTNARYFNYTL 476

Query: 270 VDA 272
           VDA
Sbjct: 477 VDA 479