Pairwise Alignments

Query, 339 a.a., Transcriptional regulators from Pseudomonas stutzeri RCH2

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 1e-38
 Identities = 106/333 (31%), Positives = 166/333 (49%), Gaps = 8/333 (2%)

Query: 13  TLSDVARSAGCSLMSASRALSQPDLVSDALRERVELAVKALGYVPHPAARSLASSRSNLV 72
           T+ DVA  A  S+ + S  ++    VS  +RERVELA++ LGYVP+  ARSL S+ ++ +
Sbjct: 3   TIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTL 62

Query: 73  AVIIPSLSNAVFVDTVEAIQRVLMPAGYEMMIGVSHYRPEEDERLLRAYLAHQPAGLL-- 130
            ++IP+ SN  F + V  ++     AGY +++  +   P      L+     +  GL+  
Sbjct: 63  GMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVV 122

Query: 131 LTGFERSDAARAVLANYTAPMVTLMELSERPDDYCVGFSQLEAGVAMTRTLLERGYRHVA 190
           LTG    DA    L     P V +      P    V  + ++ G+   R LL  G++ +A
Sbjct: 123 LTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKRIA 182

Query: 191 FAAAQLDPR-TLQRAEGYRQAMRQAGRYEPTLE----LLTPQLSSIGLGAELLDRLLAQH 245
               Q     + QR EG+R A+ +AG           L     +S G G E +  +L   
Sbjct: 183 CIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQG-GYEAMHAILRTE 241

Query: 246 PQIDAVFFNNDDLALGALFRAHQLGLEVPGRLAIAGFNDLPAAAWMHPALSTVRTRRGEI 305
            +  AVF  ND +A+GAL  AH+ G+ VP  L+I GF+D+  +A+  P L+TV   +  I
Sbjct: 242 RKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKERI 301

Query: 306 GELAAQMLLSLMRGQQPAERCIDVGFEVVMRDS 338
           G +A  MLL  M G++   R + +  E+ +R S
Sbjct: 302 GAMAVDMLLEQMGGKRRDARKVVLQPELRVRAS 334