Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 426 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score =  281 bits (720), Expect = 2e-80
 Identities = 151/416 (36%), Positives = 251/416 (60%)

Query: 1   MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVP 60
           MT++   ++L   M +G+P+A +L L GS+ +       V+ LA  L   ++ + LLA+P
Sbjct: 1   MTILFLFAALFVLMFIGVPVAVSLGLAGSLTIMIFSQDSVRSLAIKLFETSEHYTLLAIP 60

Query: 61  FFILAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALAT 120
           FF+LAG  M  GG++RR+I  A A  GH RGGL   A+ A +L A++SGS+ A  AA+ +
Sbjct: 61  FFLLAGAFMTTGGVARRLIDFANACVGHIRGGLAIGAVLACMLFAALSGSSPATVAAVGS 120

Query: 121 LLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLI 180
           + +  M   GYP +  +G+V   G +  +IPPS+  V+Y   T TS+ +LF+AG+VPG++
Sbjct: 121 IAIAGMVRSGYPQAFGAGIVCNAGTLGILIPPSVVMVVYAAATETSVGKLFMAGVVPGIL 180

Query: 181 MGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA 240
           +G  L++A  +IA + + P   +AS  E           L+L VII+GG+  G+FTPTEA
Sbjct: 181 LGGALMIAIYIIAVKKNLPALPRASFREWLSAARKAIWGLLLMVIILGGIYSGMFTPTEA 240

Query: 241 AVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDE 300
           A VAAVY+  V+  +Y++++     +VL  + + +  +MF+ A A + A+++T  Q+P  
Sbjct: 241 AAVAAVYSAFVALFVYKDISLRDCPKVLLESGKLSIMLMFIIANAMLFAHVLTTEQIPQA 300

Query: 301 IAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVM 360
           I A +      P + ++ + ++++  G  ++ +  ILIL P+L PIAI+ GIDP++ G++
Sbjct: 301 ITAWVIEAGLQPWMFLLVVNIVLLIAGAFMEPSAIILILAPILFPIAIQLGIDPIHLGII 360

Query: 361 FVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFLIYLVIVGLLIAVPSI 416
            V+   IGLITPPVG  L V   +  + +  ++R V+P+  + L  + ++  VPSI
Sbjct: 361 MVVNMEIGLITPPVGLNLFVASAVTGMPVTQVIRAVLPWLALMLSFLVIITYVPSI 416