Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 426 a.a., C4-dicarboxylate ABC transporter permease from Pseudomonas simiae WCS417

 Score =  275 bits (704), Expect = 1e-78
 Identities = 151/424 (35%), Positives = 247/424 (58%)

Query: 1   MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVP 60
           M V+     L  FM LG+PIA +L L+G+V +       V  LA  L   +D++  LA+P
Sbjct: 1   MAVLCLFLLLFVFMFLGVPIAISLGLSGAVSILMFSQDSVSSLAIKLFETSDAYTFLAIP 60

Query: 61  FFILAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALAT 120
           FF+L+G  M  GG+++R+I  A A  GH RGGL   A+ A +L A++SGS+ A  AA+ +
Sbjct: 61  FFLLSGAFMTTGGVAQRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGS 120

Query: 121 LLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLI 180
           + +  M   GYP +  +G++   G +  +IPPS+  V+Y   T TS+ +LF+AG++PGL+
Sbjct: 121 IAVAGMVRSGYPKAFGAGIICNAGTLGILIPPSIVMVVYSAATETSVGKLFMAGVIPGLL 180

Query: 181 MGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA 240
           +G+ L++A  ++AR    P Q +A+  E           L+L VII+GG+  G+FTPTEA
Sbjct: 181 LGLMLMIAIYIVARIKKLPAQPRATFREWLTSARRAFWGLLLLVIILGGIYSGMFTPTEA 240

Query: 241 AVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDE 300
           A VAAVY+  V+  +Y+++      +VL  + R    +MF+ A A + A+++T  Q+P E
Sbjct: 241 AAVAAVYSAFVALFIYKDMQLRDCPKVLLESGRLAIMLMFIIANAMLFAHVLTTEQIPQE 300

Query: 301 IAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVM 360
           I A +      P   ++ + ++++  G  ++ +  +LIL P+  PIA+K GIDP++ G++
Sbjct: 301 ITAWVLSEGLTPIGFLIMVNVVLLIAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIV 360

Query: 361 FVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFLIYLVIVGLLIAVPSIITVP 420
            V+   IGL+ PPVG  L V   +  L +   +R  +P+ +I LV + ++  +P I    
Sbjct: 361 MVVNMEIGLVHPPVGLNLFVTSAVTGLTLGQTIRAALPWLMILLVFLIMVTYLPFISLAL 420

Query: 421 LAWL 424
             WL
Sbjct: 421 PHWL 424