Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 425 a.a., 2,3-diketo-L-gulonate transporter large permease YiaN from Escherichia coli ECOR38

 Score =  478 bits (1231), Expect = e-139
 Identities = 232/424 (54%), Positives = 326/424 (76%)

Query: 1   MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVP 60
           M V++FL  LLG + +G+PIA+ALLL G+ LM++L  +DVQ++AQ L  GADSF LLA+P
Sbjct: 1   MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLGMFDVQIMAQTLVNGADSFSLLAIP 60

Query: 61  FFILAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALAT 120
           FF+LAGE+MNAGG+S+RI+ +     GHK GGLGYV + A++++AS+SGSA+ADTAA+A 
Sbjct: 61  FFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAA 120

Query: 121 LLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLI 180
           LL+PMMR   YP++ ++GL+A+GGIIAPIIPPS+PF+I+GV +G SIS+LF+AG+ PG++
Sbjct: 121 LLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGMM 180

Query: 181 MGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA 240
           MG  L++ W   A R++ P+Q+KA+  E     V G  AL LPVII+GG R GLFTPTEA
Sbjct: 181 MGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTEA 240

Query: 241 AVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDE 300
             VAA YAL V+T++YRE+ +A L  VL  A++TT+ VMFL A+A VSA++IT+A+LP  
Sbjct: 241 GAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPMM 300

Query: 301 IAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVM 360
           ++ +L PL   P+LL + IML ++ VGMV+DLTPT+LIL PVL P+  +AGIDP+YFGVM
Sbjct: 301 VSDLLQPLVDSPRLLFIVIMLAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGVM 360

Query: 361 FVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFLIYLVIVGLLIAVPSIITVP 420
           F++  SIGLITPP+G VLNV+ G+ +L+ +  VRGV P+ L+   ++ + + +P +I +P
Sbjct: 361 FIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIILP 420

Query: 421 LAWL 424
           L W+
Sbjct: 421 LKWI 424