Pairwise Alignments

Query, 425 a.a., D-gluconate TRAP transporter, large permease component (from data) from Pseudomonas stutzeri RCH2

Subject, 425 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  473 bits (1218), Expect = e-138
 Identities = 238/425 (56%), Positives = 317/425 (74%)

Query: 1   MTVVVFLSSLLGFMTLGMPIAFALLLTGSVLMWYLDFWDVQLLAQNLQAGADSFPLLAVP 60
           MT+ VF+ SLLG M +G+P+AF+L+  G VLMWY+  ++  ++AQN+ +GAD+F LLA+P
Sbjct: 1   MTLFVFVGSLLGAMAIGVPVAFSLMFCGVVLMWYMGMFNTAIIAQNMISGADTFTLLAIP 60

Query: 61  FFILAGELMNAGGISRRIIAMAQAYFGHKRGGLGYVAIAASVLLASMSGSALADTAALAT 120
           FFILAGELMN+GG+SRRII  A A  GH RGGLG VAI A++++AS+SGSA ADTAALA 
Sbjct: 61  FFILAGELMNSGGLSRRIIDFAIALVGHIRGGLGIVAIVAAIIMASISGSAAADTAALAA 120

Query: 121 LLLPMMRERGYPLSSSSGLVAAGGIIAPIIPPSMPFVIYGVVTGTSISQLFLAGMVPGLI 180
           +L+PMM + GY +  S GL+AAGGIIAP+IPPSM F+++GV    SI+QLFLAG+VPG++
Sbjct: 121 ILIPMMAKAGYNIPRSGGLIAAGGIIAPVIPPSMAFIVFGVAANVSITQLFLAGIVPGIL 180

Query: 181 MGMGLIVAWTLIARRIDEPKQEKASAAERRRVLVDGAAALMLPVIIVGGLRGGLFTPTEA 240
           MG+ LI+AW ++ R+ +     K S  ER    V    AL +PVII+GG++ G+ TPTEA
Sbjct: 181 MGISLIIAWLIVVRKDNIKPLPKTSGKERLVATVRAGWALGMPVIILGGIKAGIMTPTEA 240

Query: 241 AVVAAVYALAVSTLLYRELNWAGLVEVLTRASRTTASVMFLCAAATVSAYMITLAQLPDE 300
           AVVAA YAL V  ++YREL  A L  VL RA+++T+ +MFL  AA VSA++IT A +P+E
Sbjct: 241 AVVAAGYALFVGMVIYRELKPADLFHVLLRAAKSTSIIMFLVCAALVSAWLITAANIPNE 300

Query: 301 IAAMLGPLAQDPKLLMVAIMLLMIAVGMVLDLTPTILILGPVLAPIAIKAGIDPVYFGVM 360
           +A  + PL   P LLMVA+M+L+  VG  LDLTPTILIL PVL PI  +AGIDPVYFGV+
Sbjct: 301 VAGYIEPLIDRPMLLMVAMMVLVFIVGTALDLTPTILILTPVLMPIVKQAGIDPVYFGVL 360

Query: 361 FVLIGSIGLITPPVGTVLNVVGGIGRLRMETLVRGVMPFFLIYLVIVGLLIAVPSIITVP 420
           F++  +IGLITPPVG VLNVV G+GR+ +  +  GV PF +   +++ LL+  P I+ VP
Sbjct: 361 FIINNAIGLITPPVGVVLNVVSGVGRIPLGKVTIGVWPFLVAETIVLALLVIFPDIVMVP 420

Query: 421 LAWLR 425
           L +LR
Sbjct: 421 LQYLR 425