Pairwise Alignments

Query, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  281 bits (718), Expect = 6e-80
 Identities = 193/556 (34%), Positives = 301/556 (54%), Gaps = 32/556 (5%)

Query: 13  LWLIPVVAVVMLFILGLLMIQQVRSDLYRGKQESTRH-VVEAASGVFEHYRKLELSGAMT 71
           L ++PV+   ++  L  + I Q ++   R + E TR  ++  A    + Y ++ +S    
Sbjct: 12  LAVVPVLLFAVVISLTTVWILQGQA---RNEVEETRQRLLNDAKATLQSYVEVAMSTIKP 68

Query: 72  TAEAQK-----AAIEQIRLLR---YDGQDYYWINDLGPTMIMHPMQPKLDGQDLSKIKDP 123
             +A       A  + ++LL    Y    Y++  D     +     P   G+     +DP
Sbjct: 69  LYDAAAPGDTAARAQVVKLLSNTSYGKDGYFFGYDSETIRLFKGNSPDGVGKSFKDNRDP 128

Query: 124 EGKELFNEMVRIAQRDGAGLVDYMWAKPGEENPVPKISYVQLFKPWGWIIGSGIYVDDVE 183
            G  +  ++V++  +DG   + Y   +PG+   VPK+ Y +    W  +IG+ + +D +E
Sbjct: 129 NGVYVNRDLVKVG-KDGTHYLQYSSTQPGQTELVPKMGYTEYLPKWDMVIGTSVNLDGIE 187

Query: 184 QEFWNYLTRFS--LIGLLISAIMAVLVAILI---------RSIVRPLRHTMAAMANIASG 232
            +      +    + G+L+S +   +V +L+          +I+RPL    A + +IA+G
Sbjct: 188 AQVAVVEAKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAG 247

Query: 233 EADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHE 292
           E DLTR L ++  DEL  L   FNRF  K+  +V Q+ E    L      +S  + ++ +
Sbjct: 248 EGDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQ 307

Query: 293 QSQQQMLQMEQVATAINEVTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDE 352
             ++Q  + +QVATAIN+++ A QEVA++A+ AS      + +    +R ++ S+ QI  
Sbjct: 308 AMERQRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEGQAAKRVVDGSIAQIHA 367

Query: 353 LSATIGQAVDVIQSLADETTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVV 412
           L   I  +   + SL  + + I SVL VI SIAEQTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 368 LVNDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVV 427

Query: 413 ADEVRLLAQRTQQSTAEIHGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEI 472
           ADEVR LA RTQ ST EI GMI+RLQ  + AAV  +  S+ A   T  QA++AG SL  +
Sbjct: 428 ADEVRALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTM 487

Query: 473 AQALRNLSGLNASIASATLQQSHVVEDINQNVTQAA----GLAQESTLAAEQSSEAGKQL 528
           AQ +  ++ +NA IASA  +Q+ V E+IN++V Q A     +A E+ L A+ S    + L
Sbjct: 488 AQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTS----RSL 543

Query: 529 GELAGQLNRLLSQFRV 544
            EL  +L +L+ QFR+
Sbjct: 544 AELGQRLGQLVGQFRI 559