Pairwise Alignments

Query, 420 a.a., tricarboxylate porin (from data) from Pseudomonas stutzeri RCH2

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  318 bits (816), Expect = 1e-91
 Identities = 171/411 (41%), Positives = 241/411 (58%), Gaps = 12/411 (2%)

Query: 12  ARLALAVAAASLAPLAQAAFIEDSSATLQTQNIYLNRDFREGSG-QSKREEWTQGFILDV 70
           A L   V A        A F+ED  ATL  +N Y+NR+F   S  QSK EEWTQ FILD 
Sbjct: 10  ALLGAGVIAGLPGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSFILDA 69

Query: 71  QSGFTEGTVGVGLDALGMLGIKLDSGGGRTGTDLLPVHDDGSTPDEFSRLGLTAKAKIAE 130
           +SGFTEG +G G+D LG+  +KLD GGG  GT LLP HDDG   D++ RL +  KA+I++
Sbjct: 70  RSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAGKARISK 129

Query: 131 TELRYGSHIPEMPVVKASDSRTLPQVFEGGTATSKDIEGLTLIGGRLDKVIDRASTNSQD 190
           TEL+ G  +P +P++++ D R+LPQ F GG  TS +I GLTL GG+      R   + +D
Sbjct: 130 TELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDASMED 189

Query: 191 LQLNNKNSRFAGAAEADHLTFAGAEYAFNKNLTG-RYYYGELDDVYRQHFFGLLAVKPLT 249
           +          G   +D   F G EY FN++ T    +   L DVY+Q +  L   +P+ 
Sbjct: 190 MSY--------GGGVSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVG 241

Query: 250 DNSALSADLRVMFSDDTGAANAGKIDNQAWNGMLGYSLGGHKVSLGYQQMRGDTGYAYID 309
           D   L A+L     D+ G+  AG++DN+ ++GM     GG    +G Q++ GDT      
Sbjct: 242 D-WTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDTWMRVNG 300

Query: 310 GSDPFLVNFVQINDFANADERSWQARYDYNFAAMGIPGLTFLTRYVSGDNAEYNGGSNGS 369
            S   L N    + F NA+ERSWQ R+D+NF  +G+PGLT + RY+SG +    G ++G 
Sbjct: 301 TSGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTDGK 360

Query: 370 EWERDIELKYVVQSGPLKNVAVRMRNAMFRSDFA-RDADENRLIVSYSLPI 419
           EW R+ EL YV+QSG  K+++V+ RN+  R D++  + DENRLI +Y L +
Sbjct: 361 EWVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNYPLSL 411