Pairwise Alignments

Query, 560 a.a., hypothetical protein from Pseudomonas stutzeri RCH2

Subject, 1979 a.a., Histidine kinase from Rhodanobacter sp. FW510-T8

 Score =  196 bits (498), Expect = 7e-54
 Identities = 179/569 (31%), Positives = 269/569 (47%), Gaps = 33/569 (5%)

Query: 6   TSLGLVRDELFATMEEAEQSLEHFIIDRNNGGLLQQAVENLKQVRGTLNLIELTGAELLA 65
           T+L  V+ EL  T+  A ++LE ++ +      ++   ++L QVRGTL ++EL GA  +A
Sbjct: 10  TTLQWVKPELDDTLSIAREALESYVDNPGKRDYMRTCADHLHQVRGTLQMVELYGAATVA 69

Query: 66  QEILQLATDIPVGAGEDRDVQLAALSNALYVLRRYLESVDASRQEIPELLLPAINVLRQA 125
            E+ +LA  +       R+   AAL   L  L  YLE +    +++P +LLP +N LR +
Sbjct: 70  AEMEELAIALLGDRVAQREEAYAALMRGLMQLPDYLERLSGGHRDVPVVLLPLLNDLRAS 129

Query: 126 CAQPALPESFFFSVRLDHARPAVDVPARSGAAPVAEARR-----LRQMYQVGLLGFIRED 180
                LPES  F   LD   P     A S A   AEA R     LR  +Q  LLG+ R  
Sbjct: 130 RGLEPLPESAMFHPNLDAFLPEQAPAAMSEA--YAEAHRGELVDLRLRFQQQLLGWFRGQ 187

Query: 181 NLSASLKLMGRALTRLDHLFIESPASRLCWIGSAALESQLDGQLLPRKSR-KQLFSRLDR 239
           N +  L  M + L  +          RL WI S  LE    GQL       +QL  ++DR
Sbjct: 188 NAAVQLANMRKTLLAITARCHHVHGRRLWWIASGVLEGLEQGQLKGFAGEIRQLVGKVDR 247

Query: 240 ELKQVL----GNPAYEAPRSLLKELLYVVALADTQGPIASQVRQVFSLSPLPFTDHLLEE 295
            ++Q++    G+        +  +LLY+VA A  + P    +R  ++L  L      LE 
Sbjct: 248 NIRQLIEHGEGSLRGGEADEVACKLLYIVAQAKPRSPQMELLRATYALDSLLPDAGELEH 307

Query: 296 ESQRLAGPGQAVMRSLSSAIREELASLKDLLDLIER----GTAQAEAYSNLHNLLGKMAK 351
               +AG  +A++ S+S A++++L  +K+ LDL  R      AQ  A      +L ++  
Sbjct: 308 ARGSMAGHNRALLDSVSRALKDDLLRVKEALDLFLRQQNGDPAQLAAQG---EVLERVGD 364

Query: 352 TLGMVGLSSAASTL--QAQLGDVSGWSLAHAPEPQVIQRLADAVLYVESMVASLERGDRR 409
           TLGM+ LS     +  Q ++ D     +  A E  ++  +A A+LYVE   ASL+  D  
Sbjct: 365 TLGMLALSVPRRVVGEQRRVLDEIANRMRPADEETLLD-VAGALLYVE---ASLD--DHI 418

Query: 410 ESKPQVARPGMEAEAFANHQLTEARIVV---IDEATAGLALAKRAITAYLESNGEKLHLA 466
           ES       G  +EA      +EA  VV   + EA +     K AI A++ES  E   LA
Sbjct: 419 ESLGSEEESG-SSEATHGLPRSEALGVVTTLMQEAISNTGRVKDAIVAFVESGWEHDRLA 477

Query: 467 NVPFSLQAVRGGLRFLEQERAADLIGACADFIQKQMLESNQMPPEQLLETLADALTSLEY 526
             P  +  V G +  L   R A+L      FI  ++L+  ++P    ++ LADAL +LEY
Sbjct: 478 GAPALMDEVAGAMNMLSSPRPAELAQGIGRFIHYELLDDRRVPSGAQMDQLADALAALEY 537

Query: 527 YLEGGAVLRRDDSRVSVLDLASESVRALG 555
           YLE  A          +LD+A  S+  LG
Sbjct: 538 YLE--AAREHRGGLEHILDVAEHSLGLLG 564



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 2/120 (1%)

Query: 436  VVIDEATAGLALAKRAITAYLESNGEKLHLANVPFSLQAVRGGLRFLEQERAADLIGACA 495
            V IDEA   L  A   +  +    G  +H+  +   L  ++GG R        DL  A  
Sbjct: 1195 VFIDEAREILDHADGVLAQWHAEPGNLVHVPELQRDLHTLKGGARIAGLVPVGDLSHAIE 1254

Query: 496  DFIQKQMLESNQMPP-EQLLETLADALTSLEYYLEGGAVLRRDDSRVS-VLDLASESVRA 553
              ++K + +S+   P    LE   D L +L   +  G       + ++ +L LA E+  A
Sbjct: 1255 TLLEKPIRDSSGTGPLIAALEASFDQLHALVQQVSQGRTPDYPQAMINRLLALAGETALA 1314