Pairwise Alignments

Query, 482 a.a., FOG: LysM repeat from Pseudomonas stutzeri RCH2

Subject, 406 a.a., murein transglycosylase D from Escherichia coli ECRC62

 Score =  270 bits (690), Expect = 7e-77
 Identities = 162/462 (35%), Positives = 254/462 (54%), Gaps = 64/462 (13%)

Query: 23  LNDTTAITEHEDIWERIREGYKLQEHLDSNPRIEQQRLLLSSRPKSIEVVSERSSPFIHY 82
           ++D T+I    D+W  I  G +L+  +  N RI +Q+         +  V+ R+ P++++
Sbjct: 1   MDDGTSIAPDGDLWAFI--GDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYW 58

Query: 83  IVERLEERDMPLELALLPIIESSYDPFAYSPAHAVGLWQFIPSTGRHFNLRQTSWYDGRR 142
           I  ++++R+MP+EL LLPI+ES++DP A S A+A G+WQ IPSTGR++ L+QT  YD RR
Sbjct: 59  IAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARR 118

Query: 143 DITASTNAALRYLSYLHGLFNGDWLLALAAYNAGEGTVSRAIERNQKLGLPTDYWNLPLP 202
           D+ AST AAL  +  L+ +F+GDWLL +AAYN+GEG V +AI+ N+  G  TD+W+LPLP
Sbjct: 119 DVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLP 178

Query: 203 RETRDYVPKLLALSQLIQAPEAYGINLNPIANEPYFEVIALKQRMDLARVAKLADLDEDE 262
           +ET+ YVPK+LALS +++  + YG+ L           + L   +++A+VA +A +   +
Sbjct: 179 QETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSK 238

Query: 263 LYQLNPAFTRRITL--DGPQQLLVPMEKAEMLAANLALMKPQDLVDWQQYQVRAGDTLGV 320
           L   N A  +  TL   GPQ ++VP + A+                    Q+R       
Sbjct: 239 LKTFN-AGVKGSTLGASGPQYVMVPKKHAD--------------------QLR------- 270

Query: 321 IANRHHLTVNIIRDVNRLKSDTLRVGQVLSLPTSSDAKASRELLHAVARQPASTPRTYRV 380
                               ++L  G++ ++ ++            VA       R Y V
Sbjct: 271 --------------------ESLASGEIAAVQST-----------LVADNTPLNSRVYTV 299

Query: 381 KTGDNLWDIAKAQRVSVRDLQRWNRLSGSQLKVGQALFLQGPATRTPAKKDNSPTYYKVQ 440
           ++GD L  IA    VS +DLQ+WN+L GS+LK GQ+L +   ++      ++    Y+V+
Sbjct: 300 RSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVR 359

Query: 441 KGDSLYQIAKRFNVQLTNLKTWNPKGTEVLRPGQLLTLYLPN 482
           KGDSL  IAKR  V + ++  WN   T  L+PG  LTL++ N
Sbjct: 360 KGDSLSSIAKRHGVNIKDVMRWN-SDTANLQPGDKLTLFVKN 400