Pairwise Alignments

Query, 609 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 619 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  419 bits (1078), Expect = e-121
 Identities = 225/572 (39%), Positives = 324/572 (56%), Gaps = 17/572 (2%)

Query: 34  KYPASFTHFDWVNPRAPKGGRIKLMAS--GTFDTLNPYTFKGTSPSATPGFLQYGISELN 91
           KY A FTHFD+ NP APKGG ++  A   G FD + PY  KG   S   G+L   +++  
Sbjct: 38  KYAAGFTHFDYANPNAPKGGSLRRSAIEIGRFDHVLPYIDKGIGVSQVDGWLYAPLAQR- 96

Query: 92  EPLMVGTGIYDPSGDEPASSYGLIAESVEYSDNNSWVVFNLRKQARFHDGKPITAYDVAF 151
                       S DEP + YGL+AE +E +D+   + F L  +ARF DGKPITA DV +
Sbjct: 97  ------------SLDEPYTVYGLVAEKMERADDGLSLRFFLNPKARFADGKPITAEDVRY 144

Query: 152 SYRLLVKDGHPQYRTNLQGVKRVDILNRHRIRFVFEQPDNPLLVMRLGELPVLPQHYWKN 211
           S+ LL+  G  ++RT    VK V++    ++RF F   +N  L + +  LPV P+H+WK 
Sbjct: 145 SFDLLMTQGSLRFRTLFADVKHVEVEGERQVRFDFSSNENRTLPLDIATLPVFPEHWWKT 204

Query: 212 RDF-KATTFEPPLGSGPYRITHVQPGRQVVFERVRNWWGAKLPVNQGKYNFNRVDVEFYR 270
           RDF     +E PLGSGPY+++ +  G  + F R  NWWG  LPV++G YNF+ + +E++ 
Sbjct: 205 RDFANGGGYEAPLGSGPYKVSKIDSGSTITFTRDPNWWGKDLPVSRGLYNFDHLSLEYFG 264

Query: 271 DSVVAFEAFKVAEFDFYIEHQAKNWANGYEFPAMLRGDIIRAEIPHQIPTQTQALFMNSR 330
           D+ VA +  +   +DF  E  A  ++ GY  PA+  G + RA +  ++P   Q    N +
Sbjct: 265 DTEVARQVLRGGAYDFNREFSATGYSIGYNGPALDDGRLQRAHLAKEMPQPAQGYVFNVQ 324

Query: 331 RATFADQRVREALGLMFDFEWTNRALFYGAYRRSESYYPNSDFTATGKPEGGEWLLLSPY 390
           +  F D+RVR+AL +++DFEW NR +    Y R +S++ NS   AT  P   E  +L P 
Sbjct: 325 KPVFKDRRVRQALAMLWDFEWANRQMMRNMYIRQQSFFSNSPLAATQPPTQEELAILEPL 384

Query: 391 RKQLPAKLFTEPFELPRTDGRGIPRETLRRALGLLAEAGWKASDAGLLNGAGQPLRFEIL 450
           R Q+P ++FT+ F+ P TDG G+ R+   +AL LL EAGWK     L+N  G+PL F  L
Sbjct: 385 RGQVPDEVFTQVFKAPVTDGSGMIRDKQLQALALLEEAGWKPHGDKLVNAEGEPLEFTFL 444

Query: 451 LVNPRLERVLQPYVENLARIGIQANLRTVDSAQYKQRLDHYDYDMILMTLVQSLSPGIEQ 510
                LER+L PY  NLA+IGI  N+R +D++QY  R+   DYDMI+     + SPG+E 
Sbjct: 445 NAQSGLERLLLPYKRNLAQIGITLNIRRIDASQYVNRVMARDYDMIVTGFPVTTSPGMEL 504

Query: 511 HLYFHSSQVDVKGGRNYAGVANPIIDDLIAKLLAAQTRDEQVAAARAIDRVLLWNHYTIP 570
           + YF S+     G  NY  + +P +D LI  L+ A T+ + +  A A+DRVL WN+  IP
Sbjct: 505 YNYFGSAAAFDPGANNYMVLKDPAVDSLIKGLVKADTQAQMLTYAHALDRVLQWNYLWIP 564

Query: 571 NWFISNHRLAYRNRFAH-VTTPPYTLGLRAWW 601
           N++      A+ NRF            L  WW
Sbjct: 565 NYYPPGTSAAWWNRFGRPAIEAKNDEALETWW 596