Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 107/513 (20%), Positives = 188/513 (36%), Gaps = 94/513 (18%)

Query: 75  FINKGVAADDISLIYDTLTTNSLDEPFT------------VYGLLAEKIEKGPNNSWVRF 122
           F ++G  A   +  Y T T N   EP              V   LA K +  P+     F
Sbjct: 32  FCSEGSPAGFDTAQYTTATDNDAAEPLYNRLVEFEKGETGVVPALATKWDISPDGMTYTF 91

Query: 123 HLRPQARFHDGEPVK------AEDVVFTFETLMSKGAPHYRGYYAD------------VE 164
           HLR   +FH  +  K      A+DV+FTF  ++    P  + Y  +            + 
Sbjct: 92  HLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKAYPTEFPYFNGMSLNKNIA 151

Query: 165 KVVAESPRRVRFDFKHAGNRELPMILGQLPVLPKHWWEDRDFSSGSL----EVPLGSGPY 220
           KV    P  V           +  I      +    + ++   +G      + P+G+GP+
Sbjct: 152 KVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLLKAGKPSDINQKPIGTGPF 211

Query: 221 RVDKIQAGRSIRYARVEDYWGKDLPVNRGFYNFDRINFDYYRDNTVALQAFKAGHFDYWF 280
              + Q    IRY   + YW      +      D++ F    D +V +Q  KAG      
Sbjct: 212 VFQRYQKDSQIRYVANKQYW------DPSRVKLDQLIFAINTDASVRVQKLKAGECQ--- 262

Query: 281 ETSAKNWATAYDIAAVRDGRIVKDEIRNYNPTGMQ-GFI-FNIRRPQLEDRRVREALGLL 338
                   T +   A  D       ++     G   G+I +N+R    +   VR+AL + 
Sbjct: 263 -------VTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHKPFDQLEVRQALDMA 315

Query: 339 FDYEWTNRQLFNGAYTRTRSYFDNSELASSGLPDADELKVLEPLRGKIPDEVFDKAFELP 398
            + +     ++ GA           +LA + +P         P +    D + D A+   
Sbjct: 316 VNKQSILNAVYQGA----------GQLAVNAMP---------PTQWSYDDSIKDAAY--- 353

Query: 399 HTEGNGVIREQQRQAYRLLTEAGWKVENDRMLDAQDKPVKLEFLLVQAEFERVLLPYKRN 458
                        +A  LL  AG K   +  L A   PV+  +       + +    + +
Sbjct: 354 ----------NPEKAKELLKAAGVKEGTEITLWAM--PVQRPY---NPNAKLMAEMLQSD 398

Query: 459 LADLGIELEIRRVDVSQYINRLRSRDYDMIVSGF-GQSNSPGNEQREYWHSASADNPGSR 517
            A +G++++I   +  +YI R ++ ++D+ + G+ G +  P N     +   S D  G  
Sbjct: 399 WAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGWTGDNGDPDNWLGTLY---SCDAIGGN 455

Query: 518 NFIGLKDPAIDSLV-EGLIGADSRKELVTHTRA 549
           N+    DPA D L+ +  +  D  +  V + +A
Sbjct: 456 NYSMWCDPAYDKLIKQAKVVTDREQRTVLYKQA 488