Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 533 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 95/433 (21%), Positives = 169/433 (39%), Gaps = 55/433 (12%)

Query: 107 LAEKIEKGPNNSWVRFHLRPQARFHDGEPVKAEDVVFTFETLMSKGAPHYRGYYADVEKV 166
           LA K    P+     F LR   ++HDG+   + DV ++ E L+ K  P  R  +A++  +
Sbjct: 81  LATKWVISPDGLTYTFTLRQGVKWHDGKDFTSADVAYSIE-LLKKIHPRGRNTFANLTAI 139

Query: 167 VAESPRRVRFDF---KHAGNRELPMILGQLPVLPKHWWEDRDFSSG-SLEVPLGSGPYRV 222
             ++P +        K A      ++  + P++PKH +E  D ++  +   P+G+GP++ 
Sbjct: 140 --DTPDKYTAILRLSKPAPYLIRALVATETPIVPKHIYEGTDPANNPNNNAPIGTGPFKF 197

Query: 223 DKIQAGRSIRYARVEDYWGKDLPVNRGFYNFDRINFDYYRDNTVALQAFKAGHFDYWFET 282
            +   G  I Y R  DYW K  P        D++   +  D   A  AF+ G  D  + T
Sbjct: 198 KEWVRGSHIVYERNNDYWDKPKPF------VDQLIVRFVTDPAAAAVAFETGTVDLGYRT 251

Query: 283 SAKNWATAYDIAAVRDGRIVKDEIR-NYNPTGMQGFIFNIRRPQLEDRRVREALGLLFDY 341
                    D+  ++    ++ E + N   + +    FN+     ++ +VR+A+    D 
Sbjct: 252 P----VPLADLERLKKVPALRFETKGNSYSSNVTRLEFNLDNEYFKNEKVRQAVAHAID- 306

Query: 342 EWTNRQLFNGAYTRTRSYFDNSELASSGLPDADELKVLEPLRGKIPDEVFDKAFELPHTE 401
               R +                           +KV+    G++         +  H  
Sbjct: 307 ----RNVI--------------------------VKVVNYGYGQVSYSPIAPGLKAFHDP 336

Query: 402 GNGVIREQQRQAYRLLTEAGWKVENDRMLDAQDKPVKLEFLLVQAEFERVLLPYKRNLAD 461
                    ++A  LL EAG+     +        V L+F  + A+  R+    +  LA 
Sbjct: 337 APSPYAFDVKKANALLDEAGF----PKKAGGVRFSVPLDFNPIGADGPRLADYLRSALAR 392

Query: 462 LGIELEIRRVDVSQYINRL-RSRDYDMIVSGFGQSNSPG-NEQREYWHSASADNPGSRNF 519
           +GI + +R  D S +I R+   RD+    +G      P    QR YW           N 
Sbjct: 393 IGIAVTVRAQDPSAFIKRIYTDRDFAFTHNGASNLFDPTVGVQRLYWSKNFIKGVPFSNG 452

Query: 520 IGLKDPAIDSLVE 532
              ++P +D L+E
Sbjct: 453 THYQNPVVDKLLE 465