Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 611 a.a., microcin C transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  919 bits (2376), Expect = 0.0
 Identities = 425/594 (71%), Positives = 504/594 (84%)

Query: 12  AGLLSLLCMATLAEAAPRHALTLYDEKPKYPADFQHFEYVNPDAPKGGTLRQAGFGSFDS 71
           AG L L C++  A AAP+HALTLYDE PKYPADF+HF+YVNPDAPKGGT RQ+ FG FDS
Sbjct: 11  AGSLLLACLSLPALAAPQHALTLYDEPPKYPADFKHFDYVNPDAPKGGTFRQSSFGGFDS 70

Query: 72  LNPFINKGVAADDISLIYDTLTTNSLDEPFTVYGLLAEKIEKGPNNSWVRFHLRPQARFH 131
           LNPFINKGVAA++I +IYDTL   S DEPFT YGL+A KIEK P+NSWVRF+LRP+ARFH
Sbjct: 71  LNPFINKGVAAENIGIIYDTLMRQSQDEPFTEYGLVAGKIEKAPDNSWVRFYLRPEARFH 130

Query: 132 DGEPVKAEDVVFTFETLMSKGAPHYRGYYADVEKVVAESPRRVRFDFKHAGNRELPMILG 191
           DG P++A+DVVFTF  L+  GAP YR YYADV +VVAE P +V F FKH  NRELP+ILG
Sbjct: 131 DGHPMRADDVVFTFNALIKDGAPLYRQYYADVAEVVAEEPLKVLFKFKHKNNRELPLILG 190

Query: 192 QLPVLPKHWWEDRDFSSGSLEVPLGSGPYRVDKIQAGRSIRYARVEDYWGKDLPVNRGFY 251
           QLPVLPKHW+E+R+F+ G+LE+PLGSGPY+V K++AGRS+RY RV+DYW KDLP+NRGFY
Sbjct: 191 QLPVLPKHWYENREFNRGNLEIPLGSGPYKVAKVKAGRSVRYERVKDYWAKDLPINRGFY 250

Query: 252 NFDRINFDYYRDNTVALQAFKAGHFDYWFETSAKNWATAYDIAAVRDGRIVKDEIRNYNP 311
           NFD + FD YRD TVAL+A KAG FDY  E SAKNWATAY++ AVR+GR++K+E+ N NP
Sbjct: 251 NFDAMTFDAYRDTTVALEALKAGAFDYGLEVSAKNWATAYNVPAVREGRLIKEELPNGNP 310

Query: 312 TGMQGFIFNIRRPQLEDRRVREALGLLFDYEWTNRQLFNGAYTRTRSYFDNSELASSGLP 371
           TGMQGFIFNIRRP  +D RVR+AL LL DYEWTN+QLFNGAYTRT SYF+NSE+A+ GLP
Sbjct: 311 TGMQGFIFNIRRPVFQDVRVRQALSLLLDYEWTNKQLFNGAYTRTGSYFENSEMAARGLP 370

Query: 372 DADELKVLEPLRGKIPDEVFDKAFELPHTEGNGVIREQQRQAYRLLTEAGWKVENDRMLD 431
             +ELK+LEPLRGK+P++VF + F  P ++G+G+IREQQRQAY+LL EAGWK+ +D+M+D
Sbjct: 371 SPNELKILEPLRGKVPEQVFTEVFHNPVSDGSGMIREQQRQAYKLLQEAGWKIVDDKMVD 430

Query: 432 AQDKPVKLEFLLVQAEFERVLLPYKRNLADLGIELEIRRVDVSQYINRLRSRDYDMIVSG 491
           AQ KP  +EFLL Q EFER+LLP+KRNLADLGIEL IRRVDVSQYI RLRSRDYDMIV G
Sbjct: 431 AQGKPASIEFLLAQTEFERILLPFKRNLADLGIELNIRRVDVSQYITRLRSRDYDMIVGG 490

Query: 492 FGQSNSPGNEQREYWHSASADNPGSRNFIGLKDPAIDSLVEGLIGADSRKELVTHTRALD 551
           + QSNSPGNEQRE+W SA+ADNPGSRNFIGL+DPAID LV+ LI ADSR+ L+ H RALD
Sbjct: 491 YPQSNSPGNEQREFWSSAAADNPGSRNFIGLRDPAIDQLVDQLINADSRQSLIDHCRALD 550

Query: 552 RALLWGHYVVPNWHIKTWRVAYWNHLAHPQVTPKQDIGLMTWWRKPDAKAPVAD 605
           R LLWG+YV+PNWHIKTWRVAYWNH+ HP V+PK DIG+ TWW KPD    V++
Sbjct: 551 RVLLWGYYVIPNWHIKTWRVAYWNHIGHPNVSPKYDIGIDTWWIKPDVTPAVSE 604