Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  582 bits (1501), Expect = e-170
 Identities = 284/598 (47%), Positives = 396/598 (66%), Gaps = 4/598 (0%)

Query: 19  CMATLAEAAPRHALTLYDEKPKYPADFQHFEYVNPDAPKGGTLRQAGF--GSFDSLNPFI 76
           C+    +AAP HALT+Y E P+Y A F+HF+YVNP APKGG LR++    G FD + P+I
Sbjct: 43  CIGFTVQAAPTHALTVYGEAPRYAASFRHFDYVNPSAPKGGILRRSAIEIGQFDHILPYI 102

Query: 77  NKGVAADDIS-LIYDTLTTNSLDEPFTVYGLLAEKIEKGPNNSWVRFHLRPQARFHDGEP 135
           +KG+   ++  L+Y  L   S DEP+TVYGL+A ++E+GPN+ W+RF + P+A F DG P
Sbjct: 103 DKGIGVSEVDGLLYAPLAVRSYDEPYTVYGLIARRMERGPNDEWLRFDIDPRATFADGRP 162

Query: 136 VKAEDVVFTFETLMSKGAPHYRGYYADVEKVVAESPRRVRFDFKHAGNRELPMILGQLPV 195
           V+AEDV FTF+ LMSKG+  YR  +ADV +V  E    VRFD K    R L + L  LPV
Sbjct: 163 VRAEDVRFTFDLLMSKGSLKYRTQFADVARVTVERLHSVRFDLKPEHGRTLALDLASLPV 222

Query: 196 LPKHWWEDRDFSSGS-LEVPLGSGPYRVDKIQAGRSIRYARVEDYWGKDLPVNRGFYNFD 254
           +P+H  + RDF++G+  + P+GSGPYR+ +I  GRSI + R   +W +DLP +RG YNFD
Sbjct: 223 MPEHDLQQRDFANGAGFDKPVGSGPYRIGRIDNGRSITFERDPAWWARDLPASRGRYNFD 282

Query: 255 RINFDYYRDNTVALQAFKAGHFDYWFETSAKNWATAYDIAAVRDGRIVKDEIRNYNPTGM 314
           ++  +Y+ D  VA Q  K G +DY  E SA  +   Y+ A + DGR+ +  +    P   
Sbjct: 283 KLRIEYFGDTEVARQVLKGGGYDYNREFSATAYTLGYNGAQLDDGRLQRAHLGPAKPQVA 342

Query: 315 QGFIFNIRRPQLEDRRVREALGLLFDYEWTNRQLFNGAYTRTRSYFDNSELASSGLPDAD 374
           QGF+FN+ +PQ +DRRVR+ALG+L+D+EW+NRQ+    Y R +S F N+ LA+  LPDA 
Sbjct: 343 QGFVFNLDQPQFKDRRVRQALGMLWDFEWSNRQMMRNLYIRQQSVFSNTPLAARQLPDAG 402

Query: 375 ELKVLEPLRGKIPDEVFDKAFELPHTEGNGVIREQQRQAYRLLTEAGWKVENDRMLDAQD 434
           ELK+L PLRG++PDEVF   F  P T+G+G+IR+QQ QA  LL +AGW  E DR++++Q 
Sbjct: 403 ELKLLAPLRGQVPDEVFTTVFTAPVTDGSGIIRQQQLQALALLEQAGWHPEGDRLVNSQG 462

Query: 435 KPVKLEFLLVQAEFERVLLPYKRNLADLGIELEIRRVDVSQYINRLRSRDYDMIVSGFGQ 494
            P+   FL  QA  ER+LLP+KRNLA +G+ L IR VD +QY+NRL +RDYDMIV+G+  
Sbjct: 463 TPLAFTFLNGQAGLERLLLPWKRNLAQIGVTLNIRNVDSAQYVNRLMARDYDMIVTGYPV 522

Query: 495 SNSPGNEQREYWHSASADNPGSRNFIGLKDPAIDSLVEGLIGADSRKELVTHTRALDRAL 554
           + SPG E   Y+ SA+A +PGS N + L+DPA+D L++GL+ AD++ +++ H  ALDR L
Sbjct: 523 TLSPGAELYNYFGSAAAHDPGSNNLMVLQDPAVDHLIDGLVRADTQADMLRHAHALDRVL 582

Query: 555 LWGHYVVPNWHIKTWRVAYWNHLAHPQVTPKQDIGLMTWWRKPDAKAPVADPVEAKKA 612
            W +Y +PN++       +WN    P+V    D GL TWW         A   E +KA
Sbjct: 583 QWNYYWIPNYYPPGSSTVWWNRFGLPKVQATYDEGLDTWWEVNPTPLTNAQMAERRKA 640