Pairwise Alignments

Query, 628 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 542 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 132/581 (22%), Positives = 214/581 (36%), Gaps = 100/581 (17%)

Query: 2   NNRVRFPLLRAGLLSLLCMATLAEAAPRHALTLYDEKPKYPADFQHFEYVNPDAPKGGTL 61
           N   R  LL AGLLSL   A+    A   A+T                       +GGTL
Sbjct: 8   NKTSRHALLTAGLLSLAVGASPFAYAADAAVT---------------------PVQGGTL 46

Query: 62  RQAGFGSFDSLNPFINKGVAADDISL-----IYDTLTTNSLDEPFTVYGLLAEKIEKGPN 116
              G GS     P I+  + A  ++      + D+L   + D  FT +  LAE+ E   N
Sbjct: 47  N-IGLGSD---TPVIDPSITAYSVAALVARNVVDSLVGQAEDNRFTPW--LAERWEISDN 100

Query: 117 NSWVRFHLRPQARFHDGEPVKAEDVVFTFETLM--SKGAPHYRGYYADVEKVVAESPRRV 174
           N+   FHLR    F DG  + A  V +  + ++     + + +     ++ +       V
Sbjct: 101 NTRYTFHLRKDVTFSDGTKLDAAAVKYNLDRILDPKTTSSYAKSLLGPIDSISTPDDDTV 160

Query: 175 RFDFKH-----AGNRELPMILGQLPVLPKHWWEDRDFSSGSLEVPLGSGPYRVDKIQAGR 229
              +K           LP +  Q P   K+       +  +    +GSGP+ ++    G 
Sbjct: 161 VISYKSPFAALLQGLSLPYLGIQSPTYLKN-------TPNTSNTIVGSGPFILESFVKGS 213

Query: 230 SIRYARVEDY-WGKDLPVNRGFYNFDRINFDYYRDNTVALQAFKAGHFDYWFETSAKNWA 288
             R  +  DY WG     + G    D+I F Y  +++V L A  +G           N A
Sbjct: 214 GSRLKKRPDYHWGPGYAAHTGPAYLDKIEFKYLPESSVRLGALSSGQVQAIDAVPPANAA 273

Query: 289 TAYDIAAVRDGRIVKDEIRNYNPTGMQGFIFNIRRPQLEDRRVREALGLLFDYEWTNRQL 348
                A  +D R+  + I   NP   +    N  +   +D  VR A     D     +  
Sbjct: 274 -----ALKKDARL--ELITRENPGVNRVLYLNTSKGPFQDVNVRRAFLHAVDAASATKVA 326

Query: 349 FNGAYTRTRSYFDNSELASSGLPDADELKVLEPLRGKIPDEVFDKAFELPHTEGNGVIRE 408
           F G                        LK  + + G  P  ++   ++ P     G    
Sbjct: 327 FFGT-----------------------LKAADNILG--PSTLY---YDKPAASLGGF--- 355

Query: 409 QQRQAYRLLTEAGWKV---ENDRMLDAQDKPVKLEFLLVQAEFERVLL--PYKRNLADLG 463
             ++A +LL +AGWK    E  R  D +   V   +    +E   + L    +  +   G
Sbjct: 356 DLKKAIQLLDDAGWKTKDGEGYRTKDGKRLTVNFVYSTSSSEAAEITLFQAVQYQVKQAG 415

Query: 464 IELEIRRVDVSQYINRLRSRDYDMIVSGFGQSNSPGNEQREYWHSASADNPGSRNFIGLK 523
           I++++  VD   +I+R    DYD I S +     P   +  +   ++   P   NF   +
Sbjct: 416 IDVQLNPVDGGGFISRTNDNDYD-IASNYFVRAEPDILRTVF--DSNYIPPNGNNF--SR 470

Query: 524 DPAIDSLVEGLIGA--DSRKELVTHTRALDRALLWGHYVVP 562
             ++D  +   IGA    R++L +   A+   LL   Y VP
Sbjct: 471 THSLDDKLRKAIGAGDGERQQLYS---AIQHELLDQAYAVP 508