Pairwise Alignments

Query, 357 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 370 a.a., Inner membrane ABC transporter permease protein YejB from Xanthobacter sp. DMC5

 Score =  488 bits (1257), Expect = e-143
 Identities = 245/369 (66%), Positives = 299/369 (81%), Gaps = 13/369 (3%)

Query: 1   MLAYIFRRLLLIIPTLFGILLINFIIIQAAPGGPVEQAIAKLEGFE-GATSRIAGGGSEV 59
           MLAYI RR+ L++PT+ GI+L++F++IQ APGGPVE+ IA+L G +  ATSR++GGGS+ 
Sbjct: 1   MLAYIVRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGEDVSATSRVSGGGSDF 60

Query: 60  AVAGTS------------YRGAQGLDPELVAEIERLYGFDKPPVERFWIMLSNYLRLDFG 107
           + AG +            YRGAQGLDP  + E+E+ +GFDKPP ERF  M+++Y   +FG
Sbjct: 61  SGAGAAAQAGAAAEMSSKYRGAQGLDPAFIKELEKQFGFDKPPHERFLKMITDYATFNFG 120

Query: 108 ESFFRDAKVTDLIIEKMPVSISLGLWSTLIMYLASIPLGIAKATRHGSKFDVWTSSAIIV 167
           +S+FRD  V +LI EKMPVSISLGLW TLI YL SIPLGI KA R GS+FDVWTS+ IIV
Sbjct: 121 KSYFRDISVLELIGEKMPVSISLGLWMTLITYLISIPLGIGKAMRDGSRFDVWTSAVIIV 180

Query: 168 GYAIPAFLFAILLIVLFAGGSYWNWFPLRGLTSANFDDLSLGGKIIDYFWHLALPVTALV 227
           GYAIP+FLFAILLI+LFAGGS+ + FPLRGLTS NF  +S   +I DY WHL LP+T++V
Sbjct: 181 GYAIPSFLFAILLIILFAGGSFLDLFPLRGLTSENFWQMSWPERIADYAWHLVLPLTSMV 240

Query: 228 IGNFATLTLLTKNSFLDEINKQYVITARAKGLSKNRVLYGHVFRNAMLIIIAGFPAAFIG 287
           +G FAT+TLLTKNSFL+EI KQYV TAR KGLS++RVLYGHVFRNAMLI+IAGFP+AFI 
Sbjct: 241 LGAFATMTLLTKNSFLEEIRKQYVTTARMKGLSESRVLYGHVFRNAMLIVIAGFPSAFIA 300

Query: 288 MFFTGSLLIEVIFSLDGLGLLSFEAAINRDYPVVFGTLFLFTLLGLVVKLIGDLTYTLVD 347
            FF+GSLLIE IFSLDGLGLL FE+ +NRDYPVVF TL++F+L GL+V LI DLTY LVD
Sbjct: 301 AFFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLAGLIVGLISDLTYMLVD 360

Query: 348 PRIDFESRE 356
           PRIDFE+RE
Sbjct: 361 PRIDFETRE 369