Pairwise Alignments

Query, 357 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  150 bits (380), Expect = 4e-41
 Identities = 105/363 (28%), Positives = 166/363 (45%), Gaps = 44/363 (12%)

Query: 1   MLAYIFRRLLLIIPTLFGILLINFIIIQAAPGGPVEQAIAKLEGFEGATSRIAGGGSEVA 60
           M ++I RRL L+IPT FGI L+ F +I+  PG PVE  +                     
Sbjct: 1   MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMM--------------------- 39

Query: 61  VAGTSYRGAQGLDPELVAEIERLYGFDKPPVERFWIMLSNYLRLDFGESFFRDAKVTDLI 120
                  G + +DPE+ A+     G +KP   ++   +    + D GES      V    
Sbjct: 40  -------GERRVDPEMHAQAMERLGLNKPLYAQYLDYVGKLAQGDLGESLRTRTSVWTEF 92

Query: 121 IEKMPVSISLGLWSTLIMYLASIPLGIAKATRHGSKFDVWTSSAIIVGYAIPAFLFAILL 180
               P ++ L + + L   +  +  G+  A + GS FD       + GY++P F + ++L
Sbjct: 93  TALFPATLELSMAALLFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLIL 152

Query: 181 IVLFAGGSYWNWFPLRGLTSANFDDLSLGGKII---------DYFW----HLALPVTALV 227
           I+ F+      W P+ G     +D     G ++         D FW    HL LP   L 
Sbjct: 153 IMFFSVS--LGWTPVSGRIDLLYDIEPRTGFMLIDTLLADEPDAFWDALHHLILPAIVLG 210

Query: 228 IGNFATLTLLTKNSFLDEINKQYVITARAKGLSKNRVLYGHVFRNAMLIIIAGFPAAFIG 287
               A +  +T++S L+ + + Y+ TA+AKGLS  RV++ H  RNA++ ++       +G
Sbjct: 211 TIPLAVIARMTRSSMLEVLREDYIRTAKAKGLSPARVVFVHGLRNALIPVLT-VVGLQVG 269

Query: 288 MFFTGSLLIEVIFSLDGLGLLSFEAAINRDYPVVFGTLFLFTLLGLVVKLIGDLTYTLVD 347
               G++L E IFS  G+G    EA   RDYPVV   + L   L ++V  + D+ Y   +
Sbjct: 270 TLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGFAN 329

Query: 348 PRI 350
           PRI
Sbjct: 330 PRI 332