Pairwise Alignments

Query, 357 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  154 bits (389), Expect = 3e-42
 Identities = 109/363 (30%), Positives = 167/363 (46%), Gaps = 44/363 (12%)

Query: 1   MLAYIFRRLLLIIPTLFGILLINFIIIQAAPGGPVEQAIAKLEGFEGATSRIAGGGSEVA 60
           ML++I RRL L+IPT FGI L+ F +I+  PG PVE  +                     
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMM--------------------- 39

Query: 61  VAGTSYRGAQGLDPELVAEIERLYGFDKPPVERFWIMLSNYLRLDFGESFFRDAKVTDLI 120
                  G + +DPE+ A+     G +KP   ++   +    + D GES      V    
Sbjct: 40  -------GERRVDPEMHAQAMERLGLNKPLPVQYLDYVGKLAQGDLGESLRTRESVWREF 92

Query: 121 IEKMPVSISLGLWSTLIMYLASIPLGIAKATRHGSKFDVWTSSAIIVGYAIPAFLFAILL 180
           +   P ++ L   + L   +  +  G+  A + GS FD       + GY++P F + ++L
Sbjct: 93  LTLFPATLELAFAALLFAGVVGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLIL 152

Query: 181 IVLFAGGSYWNWFPLRGLTSANFD----------DLSLG---GKIIDYFWHLALPVTALV 227
           I+ F+      W P+ G     +D          D  L    G   D   HL LP   L 
Sbjct: 153 IMFFSVSL--GWTPVSGRIDLLYDIEPKTGFMLIDTLLSDEEGAFKDAVMHLILPAIVLG 210

Query: 228 IGNFATLTLLTKNSFLDEINKQYVITARAKGLSKNRVLYGHVFRNAMLIIIAGFPAAFIG 287
               A +  +T++S L+ + + Y+ TARAKGLS  RV++ H  RNA++ ++  F    +G
Sbjct: 211 TIPLAVIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVHGLRNALIPVLTVF-GLQVG 269

Query: 288 MFFTGSLLIEVIFSLDGLGLLSFEAAINRDYPVVFGTLFLFTLLGLVVKLIGDLTYTLVD 347
               G++L E IFS  G+G    EA   RDYPVV   + L   L ++V  + D+ Y L +
Sbjct: 270 TLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVILVNFVVDILYGLAN 329

Query: 348 PRI 350
           PRI
Sbjct: 330 PRI 332