Pairwise Alignments

Query, 357 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  173 bits (439), Expect = 5e-48
 Identities = 114/363 (31%), Positives = 175/363 (48%), Gaps = 44/363 (12%)

Query: 1   MLAYIFRRLLLIIPTLFGILLINFIIIQAAPGGPVEQAIAKLEGFEGATSRIAGGGSEVA 60
           M+ +IF +LL ++PT  GI ++ F  ++  PG PV                         
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPV------------------------- 35

Query: 61  VAGTSYRGAQGLDPELVAEIERLYGFDKPPVERFWIMLSNYLRLDFGESFFRDAKVTDLI 120
                  G +G+ PE  A++    GF +P  E++   L   L+ D G S      V    
Sbjct: 36  ---LLMAGERGISPERHAQLAEQLGFAQPIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEF 92

Query: 121 IEKMPVSISLGLWSTLIMYLASIPLGIAKATRHGSKFDVWTSSAIIVGYAIPAFLFAILL 180
           +   P ++ LGL + +I  +  +P+G+  A R GS FD  + +  +VG+++P F + +LL
Sbjct: 93  LALFPATVELGLVAIIIATVIGVPVGVIAAIRRGSWFDQISMTTALVGFSMPIFWWGLLL 152

Query: 181 IVLFAGGSYWNWFPLRGLTSANF-----------DDLSLG--GKIIDYFWHLALPVTALV 227
           I++F+G     W P+ G  S  +           D L  G  G       HL LP   L 
Sbjct: 153 IIMFSG--ILQWTPVSGRISLMYFFPSVTGFMLIDSLISGQKGAFASALSHLILPSVVLA 210

Query: 228 IGNFATLTLLTKNSFLDEINKQYVITARAKGLSKNRVLYGHVFRNAMLIIIAGFPAAFIG 287
               A +   T+++ L+ + + YV TARAKG+S +RV+  H  RNAM+ +I       IG
Sbjct: 211 TIPLAVIARQTRSAMLEVLGEDYVRTARAKGMSASRVVGIHALRNAMIPVITTI-GLQIG 269

Query: 288 MFFTGSLLIEVIFSLDGLGLLSFEAAINRDYPVVFGTLFLFTLLGLVVKLIGDLTYTLVD 347
           +   G++L E IFS  G+G    ++   RDYPVV   L L   L +VV L+ DLTY L++
Sbjct: 270 VLMAGAILTETIFSWPGIGKWMIDSISRRDYPVVQSGLLLIAGLVMVVNLLVDLTYGLIN 329

Query: 348 PRI 350
           PRI
Sbjct: 330 PRI 332