Pairwise Alignments

Query, 339 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

Subject, 346 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  134 bits (336), Expect = 4e-36
 Identities = 82/218 (37%), Positives = 125/218 (57%), Gaps = 4/218 (1%)

Query: 123 LGTDDQGRDVLARVIYGFRISVLFALTLTLISSVIGVIAGALQGFYGGWVDLVGQRLLEI 182
           LGTD  GRDVLA +++G R+S+L     TL   + G++ GA  G++GG VD V  +L+EI
Sbjct: 126 LGTDALGRDVLAGLVHGARVSLLVGACATLAGLLAGILVGATAGYFGGVVDDVLSKLIEI 185

Query: 183 WSGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALG 242
           +  +P   LLI+L +  QP+   +   +   SW  +  +VRA+F   +  ++V AARALG
Sbjct: 186 FQTVPGFILLIVLVAIAQPSVPAIALAIAAVSWPQVARLVRAQFRAIKEKDFVAAARALG 245

Query: 243 MQNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKA 302
             +G I+FR ILPNA+   +      +  AI   +AL F+G G P    S G ++  G+ 
Sbjct: 246 FGHGRIIFREILPNALPPVIVLASVTVATAILMESALSFMGLGDP-NVVSWGSMIGTGRD 304

Query: 303 NLQAPWLGISAFMVLAIMLTLLV--FIGEAARDAFDPR 338
            L+  W  +SA   +AI+LT+L    IG+   +A +PR
Sbjct: 305 LLRTAWY-LSAVPGVAIVLTVLSLNLIGDGLNEALNPR 341