Pairwise Alignments

Query, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

Subject, 539 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  400 bits (1027), Expect = e-116
 Identities = 235/527 (44%), Positives = 334/527 (63%), Gaps = 11/527 (2%)

Query: 10  LVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 69
           L+EVRDL+V +    Q  + +  ++F + +GETLA+VGESGSGKS  A+++L LLP   A
Sbjct: 6   LIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGN-A 64

Query: 70  RHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKG 129
           R  QGQ+   G D+ +A E+A R++RG  I +V Q+PM SLNP   +G+QI E L++ +G
Sbjct: 65  RIDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARG 124

Query: 130 LRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEPT 189
            R     A+ L LL+ VG+ EP  R R YPHELSGG RQRV+IA+ALA EP L+IADEPT
Sbjct: 125 RRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRLIIADEPT 184

Query: 190 TALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCEDL 249
           +ALDVTVQ +IL+ L+ L A  G++LL+I+HDL +    A R+ VM++G  VE      +
Sbjct: 185 SALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGSPRQI 244

Query: 250 FRAPQHPYTQELLAAEPSGGPVAVEEAP----PLLEVDDLRVWFPIKKGLLRRTVDHIKA 305
               + PYT+ LL A P+  P     AP    PLL +  +      K+  L    +H  A
Sbjct: 245 LWGARQPYTRALLDAAPAFVPRRRPAAPRGQTPLLRLSHVG-----KRFELPGKNEHYTA 299

Query: 306 VDGVNFSLPKGQTLGIVGESGSGKST-LGLAILRLLGSRGEIRFQGQHLQSMSQRQVRPL 364
           +  ++  L  GQTL IVGESGSGKST L +A+     S+G++ F G+ +   +  Q RPL
Sbjct: 300 LHDLSLELHAGQTLAIVGESGSGKSTALRIALGLEKPSQGQVVFAGEDVTGYTWSQFRPL 359

Query: 365 RRQMQVVFQDPFGSLSPRMSVGQIVGEGLHIHRMGNAKEQEQAIIEALVEVGLDPETRHR 424
           RR++Q+V Q+PF +L PR +V   V E L    +   +  E+   E +  V L  +   R
Sbjct: 360 RRRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQLPVQFLDR 419

Query: 425 YPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLF 484
            P E SGGQRQR+AIARAL L+P ++LLDEP SALD +VQ Q++ LL  LQ +  + Y+ 
Sbjct: 420 LPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGMAYVL 479

Query: 485 ISHDLAVVRALSHQMMVVKQGQVVEQGAAADIFAAPQHPYTQQLLES 531
           +SHDLAVV +++ Q++V+++GQVVEQG A  + +     YT+ L+++
Sbjct: 480 VSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDA 526



 Score =  173 bits (438), Expect = 2e-47
 Identities = 110/263 (41%), Positives = 158/263 (60%), Gaps = 15/263 (5%)

Query: 278 PLLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLAIL 337
           PL+EV DL V +              +A+  ++FSL +G+TL +VGESGSGKSTL  A+L
Sbjct: 5   PLIEVRDLSVSYSFAG-------QRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALL 57

Query: 338 RLLGS-----RGEIRFQGQHLQSMSQRQVRPLR-RQMQVVFQDPFGSLSPRMSVGQIVGE 391
            LL       +G++   G  +   S+R  R LR R + +V QDP  SL+P   +GQ + E
Sbjct: 58  GLLPGNARIDQGQLWVDGVDMAQASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAE 117

Query: 392 GLHIHRMGNAKEQEQAIIEALVEVGLD-PETRHR-YPHEFSGGQRQRIAIARALVLKPAL 449
            L + R      QE  ++  L +VGLD P  R R YPHE SGG RQR+ IA AL  +P L
Sbjct: 118 ALQLARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGGMRQRVLIAIALAGEPRL 177

Query: 450 ILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQVVE 509
           I+ DEPTSALD TVQR++++ L+ L A+  ++ L I+HDL +    + +++V+KQG+ VE
Sbjct: 178 IIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVE 237

Query: 510 QGAAADIFAAPQHPYTQQLLESA 532
            G+   I    + PYT+ LL++A
Sbjct: 238 HGSPRQILWGARQPYTRALLDAA 260



 Score =  163 bits (412), Expect = 2e-44
 Identities = 105/245 (42%), Positives = 144/245 (58%), Gaps = 12/245 (4%)

Query: 33  VTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPQGQILFHGQDLLKADEKAMR 92
           ++ ++  G+TLA+VGESGSGKS      L L      +  QGQ++F G+D+        R
Sbjct: 303 LSLELHAGQTLAIVGESGSGKSTALRIALGL-----EKPSQGQVVFAGEDVTGYTWSQFR 357

Query: 93  KIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKGLRGKAATARTLELLELVGIPEPR 152
            +R  RI +V Q P  +L+P  TV   + E L     LRG+A   +  EL+  V +P   
Sbjct: 358 PLR-RRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALERKARELITRVQLPV-- 414

Query: 153 KRIRAYPHELSGGQRQRVVIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARLG 212
           + +   P ELSGGQRQRV IA ALA EPE+L+ DEP +ALDV+VQ +IL LL ELQ  LG
Sbjct: 415 QFLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELG 474

Query: 213 MALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCEDLFRAPQHPYTQELLAAEPSGG--- 269
           MA +L+SHDL +V  +A +V V++RG+VVEQ     +       YT+ L+ A P      
Sbjct: 475 MAYVLVSHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDAIPGHSRSM 534

Query: 270 -PVAV 273
            PVA+
Sbjct: 535 LPVAI 539