Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 378 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 9/220 (4%)

Query: 6   LAIALALLTALTAHAAEPIRIGLNYPSTGNYKSEGLELSRGALLAVDEINGRGGLLGRQL 65
           LA+A+A    ++      ++IG+  P TG   + G +  +GA  A D IN  GG+ G ++
Sbjct: 11  LALAVAAALGVSTFVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGINGEKI 70

Query: 66  QLVSLNSAARPEKAQANIERFANQGAAM-VFGGANSEEALAAGQRARELGLLYFPTLGYA 124
            LV+ + A  P++A A   R A+Q   + V G   S   + A +   E G++   T G  
Sbjct: 71  VLVAGDDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAI-TPGST 129

Query: 125 NEITGRDGHRHLFRESNSAWMSARVLGEYLSWHMPNRRYHYVSLDDAWGRSMEQALREAT 184
           N      G   +FR          V G+Y+   +  ++   ++  D +G+ +  A     
Sbjct: 130 NPQVTERGLGAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADA----- 184

Query: 185 KSRDRARHGYSKIAERGARRG--DYLAALQKAAASNADVL 222
            +    + G   + E G  RG  D+ A + K  ++ ADV+
Sbjct: 185 TAAQLTKRGVKPVLEEGLTRGEKDFSALVTKIRSTGADVV 224