Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 400 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 23/372 (6%)

Query: 1   MLRHSLAIALAL---LTALTAHAAEPIRIGLNYPSTGNYKSEGLELSRGALLAVDEINGR 57
           +L+ SL  A AL   L+  +A AAEP         +G + S G     G+ LAV +    
Sbjct: 6   LLKASLTAAAALSLPLSIRSAFAAEPFTFYGLKSMSGAFASYGKFADMGSRLAVQQ---H 62

Query: 58  GGLLGRQLQLVSLNSAARPEKAQANIERFANQGAAMVFGGAN-SEEALAAGQRARELGLL 116
             +LGR L    +++     KA   ++    Q  A  F G   S  ALA  +   ++G +
Sbjct: 63  PQVLGRALNYKVIDTEGNAGKAVRKVQEAIQQDGARFFQGCTLSSSALAVAKEVDKVGGV 122

Query: 117 YFPTLGYANEITGRDGHRHLFRESNSAWMSARVLGEYLSWHMPN-RRYHYVSLDDAWGRS 175
           +   +G A+E+TG+D +   FR S   + + R     L   +P+ +R++ ++    +G +
Sbjct: 123 FMTPVG-ADEVTGKDCNLATFRWSVPTYGAIRETMVPLIKLLPDAKRWYTITPQYVFGEA 181

Query: 176 MEQALREATKSR--DRARHGYSKIAERGARRGDYLAALQKAAASNADVLVIVLLGEDLVQ 233
           + +  +   K    +   + Y  + E+     ++   L  A A+  DVLV++  G     
Sbjct: 182 LLEGAKNVLKENGLEHIGNSYHSLQEQ-----EFSGYLTNAIAAKPDVLVLLNFGSQSSN 236

Query: 234 TMRLAHTLELGKRMQI-IVPNLTQSIVEQAGPLVMEHV-IGTEAWTWRVPKLVGSTEGQA 291
           T+R A    + +RM++ +V +      ++ G  V+E V +G + W       V +   + 
Sbjct: 237 TLRQAVNFGIKERMKVLLVWSAGLDQFQELGSDVLEGVYLGAQYW-----HQVDTPLNRE 291

Query: 292 FADRFIAQHQAYPGSTAASAYGIVRQWADAAQRAGSIDAEAVIAAVENHRYQLLKDEQYW 351
                 AQ+   P    A+ Y   +   D     GS D   V  A++   Y+    ++  
Sbjct: 292 LVKLTQAQYGINPTYPLAADYISTKIMLDTIIATGSFDGPTVAKAMQGLSYEGPTGKESI 351

Query: 352 RDFDHQNVQSIY 363
           R  DHQ ++  Y
Sbjct: 352 RAGDHQVIKDYY 363