Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 393 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score = 74.3 bits (181), Expect = 6e-18
 Identities = 84/367 (22%), Positives = 143/367 (38%), Gaps = 8/367 (2%)

Query: 7   AIALALLTALTAHAAEPIRIGLNYPSTGNYKSEGLELSRGALLAVDEINGRGGLLGRQLQ 66
           A A A++    A A   I++G+    TG +   G  ++ GA  AV+++N +GG LGR+ +
Sbjct: 8   AAAAAVVLQSGALAQNAIKLGVVNIDTGPFAVSGAFVNDGAAFAVEQLNAQGGALGRKYE 67

Query: 67  LVSLNSAARPEKAQANIERFANQGAAMVFGGAN-SEEALAAGQRARELGLLYFPTLGYAN 125
           LV+ N A  P  A A   R   Q     F G N S  +LA   +   L  L+      ++
Sbjct: 68  LVTQNHAGTPASAIAAATRLVEQQGVSFFTGLNPSGTSLAIASKMPGLNALFIDATAASD 127

Query: 126 EITGRDGHRHLFRESNSAWMSARVLGEYLSWHMPNRRYHYVSLDDAWGRSMEQALREATK 185
           ++TG++   + FR   +  M      E        + +  +  D A G    +    A +
Sbjct: 128 DLTGKNCGANYFRVGITDGMMVNSFREQTK-ASGIKNWDLLMADIAVGHDTAKRFAAAMQ 186

Query: 186 SRDRARHGYSKIAERGARRGDYLAALQKAAASNADVLVIVLLGEDLVQTMRLAHTLELGK 245
                 +         +  G Y+A L    A    +      G  LV+  +     E  K
Sbjct: 187 ESGGKVNKTLFAPITASDLGSYIAQLLDKPADGLLMYYPSSGGIALVKQQQAFKLFE--K 244

Query: 246 RMQIIVPNLTQSIVEQAGPLVMEHVIGTEAWTWRVPKLVGSTEGQAFADRFIAQHQAYPG 305
              ++  ++   I+  A       +   +++ W +P         AF   F A+++  P 
Sbjct: 245 YKTVLSASMVNEILIGAHGDASVGLWSAQSYFWSMP----GDRNAAFVKAFEARYKRKPT 300

Query: 306 STAASAYGIVRQWADAAQRAGSIDAEAVIAAVENHRYQLLKDEQYWRDFDHQNVQSIYAV 365
              A AY        A  +A S D  AV AA+   +   +  +   R  DHQ ++ +  V
Sbjct: 301 YIDADAYMSFELVHQAILKAKSADVPAVRAALSGLKASTVVGDVEMRAADHQLLRPLVVV 360

Query: 366 RVRNRSE 372
           +    SE
Sbjct: 361 QAAKASE 367