Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 402 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score = 97.4 bits (241), Expect = 7e-25
 Identities = 96/395 (24%), Positives = 179/395 (45%), Gaps = 21/395 (5%)

Query: 7   AIALALLTALTAHAA-----EPIRIGLNYPSTGNYKS-EGLELSRGALLAVDEINGRGGL 60
           A+ALAL  A +A A+     + IRIG     +G Y+  +G   +    +A+ ++ G   +
Sbjct: 7   ALALALGAAFSAGASAQVSDDVIRIGFISDMSGLYRDYDGPAGAEAIRMAIADMGG--AI 64

Query: 61  LGRQLQLVSLNSAARPEKAQANI-ERFANQGAAMVFGGANSEEALAAGQRARELGLLYFP 119
            G++++LV+ +   +P+ A A   E F  Q   M+ GG NS  A+A    A +    YF 
Sbjct: 65  DGKKIELVTADHQNKPDIAAAKAREWFDVQKVDMLIGGVNSGAAIAMAGVAADKKKPYFV 124

Query: 120 TLGYANEITGRDGHRHLFRESNSAWMSARVLGEYLSWHMPNRRYHYVSLDDAWGRSMEQA 179
               A+ +T      +    +      AR     +      + +++V+ D A+G +++  
Sbjct: 125 VGSGASSLTNEYCSPYTVHYAYDTVAMARGTASAVV-KAGGKSWYFVAADYAFGAALQN- 182

Query: 180 LREATKSRDRARHGYSKIAERGARRGDYLAALQKAAASNADVLVIVLLGEDLVQTMRLAH 239
             +ATK+   +    +   +      D+ + + +A  S A VL +   G D V  ++ A 
Sbjct: 183 --DATKTVLASGGTVAGSVKHPLGASDFSSFMLQAQNSKAQVLALANAGGDTVNAIKSAA 240

Query: 240 TLELGKRMQIIVPNLTQSIVEQAGPLVMEHVIGTEAWTWRVPKLVGSTEGQAFADRFIAQ 299
              LGK M++    +T + V   G    + +  T++W W       S E + ++ RF  +
Sbjct: 241 EFGLGKNMKLAGMIITINDVHALGLKTSQGMYLTDSWYWNQ-----SPESREWSRRFFDK 295

Query: 300 HQAYPGSTAASAYGIVRQWADAAQRAGSIDAEAVIAAVENHRYQLLKDEQYWRDFDHQNV 359
           H+  P S  A  Y    Q+  A + AGS DA+ V+A +   ++  +  +  W   D   V
Sbjct: 296 HKRMPSSFHAGDYSAALQYLQAVKAAGSDDADKVMAQLRKTKFNDMFVKGGWLRDDGLMV 355

Query: 360 QSIYAVRVRNRSEIMQDRFKQDYFTIIHRMDGEAA 394
             ++ ++V+  +E    +   DY+ ++  + GEAA
Sbjct: 356 HDMHLMQVKTPAE---SKEPWDYYKVVEPIRGEAA 387