Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 9/220 (4%)

Query: 6   LAIALALLTALTAHAAEPIRIGLNYPSTGNYKSEGLELSRGALLAVDEINGRGGLLGRQL 65
           LA+A+A    ++++    ++IG+  P TG   + G +  +GA  A D+IN  GG+ G ++
Sbjct: 11  LALAVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKI 70

Query: 66  QLVSLNSAARPEKAQANIERFANQGAAM-VFGGANSEEALAAGQRARELGLLYFPTLGYA 124
            LV  + A  P++A A   R  +Q   + V G   S   + A +   E G++   T G  
Sbjct: 71  VLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAI-TPGST 129

Query: 125 NEITGRDGHRHLFRESNSAWMSARVLGEYLSWHMPNRRYHYVSLDDAWGRSMEQALREAT 184
           N      G   +FR          V G+Y+   +  ++   +   D +G    Q L +AT
Sbjct: 130 NPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYG----QGLADAT 185

Query: 185 KSRDRARHGYSKIAERGARRG--DYLAALQKAAASNADVL 222
           K++   R G   +   G  RG  D+ A + K  ++ ADV+
Sbjct: 186 KAQLEKR-GVKPVLYEGLTRGEKDFSAVVTKIRSTGADVV 224