Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

Subject, 369 a.a., Leu/Ile/Val-binding protein from Azospirillum sp. SherDot2

 Score = 63.9 bits (154), Expect = 7e-15
 Identities = 83/346 (23%), Positives = 137/346 (39%), Gaps = 27/346 (7%)

Query: 5   SLAIALALLTALTAHAAEPIRIGLNYPSTGNYKSEGLELSRGALLAVDEINGRGGLLGRQ 64
           S   A ALL       A+ I IGL   +TG   + G +   GA  AV +IN +GG+LG++
Sbjct: 7   SFVSATALLAGFGTAQAD-IVIGLGTATTGPVAALGEQSVYGAKQAVADINAKGGVLGQK 65

Query: 65  LQLVSLNSAARPEKAQANIERFANQGAAMVFGGANSEEALAAGQRARELGLLYFPTLGYA 124
           L L   + A  P +A A   +F  +    V G   S  ++ A    +E G++   T    
Sbjct: 66  LVLKVGDDACDPRQAVAVANQFVREKVTAVVGHLCSGASIPAADVYQEEGVV-MVTPTAT 124

Query: 125 NEITGRDGHRHLFRESNSAWMSARVLGEYLSWHMPNRRYHYVSLDDAWGRSMEQALREAT 184
           N +    GH ++FR          V G YL+     +    +    A+G+ +   + E  
Sbjct: 125 NPLLTAKGHPNIFRVCGRDDQQGVVAGTYLAQTFKGKNVAVLDDKQAYGKGLADVVVETL 184

Query: 185 KSRDRARHGYSKIAERG---ARRGDYLAALQKAAASNADVLVIVLLGEDLVQTMRLAHTL 241
           +          K+A RG   A   D+ A +      + D +       +L   +R A   
Sbjct: 185 EKAG------GKVAYRGSVTAGEKDFSALITSLKDKSIDAVYYGGYHPELGLIVRQAQ-- 236

Query: 242 ELGKRMQIIVPNLTQ-----SIVEQAGPLVMEHVIGTEAWTWRVPKLVGSTEGQAFADRF 296
           E G + Q I  +        SI   AG   +     + A   +  +L+ S +     +  
Sbjct: 237 EQGMKPQFIAGDGLNNQEYWSITGPAGEGTLYTDSASAASDPKAQELIASFKKAGLPE-- 294

Query: 297 IAQHQAYPGSTAASAYGIVRQWADAAQRAGSIDAEAVIAAVENHRY 342
                  PG+ A  +Y  V+  A+  Q+AGS D+  +   + +  Y
Sbjct: 295 -------PGNFAFYSYAAVQVIAEGLQKAGSTDSGKLAKTLHSGSY 333