Pairwise Alignments

Query, 304 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

Subject, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 6  LVLALWLTLCGALAQAEIVKVRAFDDIIESGVLKVAMYEKFPPYSYLHDGEPR--GVDVE 63
          L LA+     G  A A+       DD+ ++GVL+VA ++  PP+ Y+     +  G D++
Sbjct: 11 LALAIGSFTLGGAAWAD-----RLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQVGHDID 65

Query: 64 LARKLAEGLGLKLQVLWVTP 83
          LA + A+ LG+K++++   P
Sbjct: 66 LATEFAKSLGVKIELVPTNP 85