Pairwise Alignments

Query, 214 a.a., Uncharacterized low-complexity proteins from Pseudomonas stutzeri RCH2

Subject, 867 a.a., Pentapeptide repeat family protein from Variovorax sp. SCN45

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 17/171 (9%)

Query: 41  DLRGADLSNQDLRRINLAGANLSGANLRHANLDLANLEKADLTGATLNRASLQQANLRLA 100
           +L GADLS+ DL     +GA+ +GANL  ANL  A L   + T A L RA L++A L   
Sbjct: 552 NLIGADLSDMDL-----SGADFTGANLEDANLQGARLAGCNFTQAVLARARLERAVLADC 606

Query: 101 NFTNARLIAVQGWGLFAQAAQFKGADLTGAYLEFARMSGAKMHGSKLHAA-----DLEMT 155
            F +A L A    G     A  + A+ +        M  A    + +H +     DL  +
Sbjct: 607 RFDHANLGAALCDGADFSRASLRHANCSKTVFRACAMGSAVFEATHVHESVWQRCDLRQS 666

Query: 156 -WLSKADLKGADLTDANLQEAKLNDANLADAVLTGARRHYATFQGTNMEGC 205
            WL  A +K     D + +EA        +  L G      +F    +EGC
Sbjct: 667 RWLQVAMIK-MRFEDVSFEEASFRQMGWIECALVG-----VSFARATLEGC 711



 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 55/173 (31%), Positives = 71/173 (41%), Gaps = 41/173 (23%)

Query: 24  LTVNGCTLQPDSQCPNADLRGADLSNQDLRRINLAGANLSGANLRHANLDLANLEKADLT 83
           L   G TL   S   ++ L GA L +  LR   L G  L+GA+LR   L+  +    DL 
Sbjct: 722 LDFTGATLVSSSFGYHSSLAGAVLRDAVLRHCGLRGVTLAGADLRGVRLEGCDFSGCDLR 781

Query: 84  GATLNRASLQQANLRLANFTNARLIAVQGWGLFAQAAQFKGADLTGAYLEFARMSGAKMH 143
           GA L+R                    V G  LF +   F GA L G              
Sbjct: 782 GAKLDR-------------------LVGGESLFIR-TDFTGASLAG-------------- 807

Query: 144 GSKLHAADLEMTWLSKADLKGADLTDANLQEAKLNDANLADAV-LTGARRHYA 195
                 AD   + LSK+DL+ ADL DANL  A ++ A +     L GA  H+A
Sbjct: 808 ------ADFIDSNLSKSDLRLADLHDANLFRADVSQAFIDGTTRLDGAYTHHA 854



 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 61/225 (27%), Positives = 83/225 (36%), Gaps = 61/225 (27%)

Query: 41  DLRGADLSNQDLRRINLAGANLSGANLRHANLDLANLEKADLT---------------GA 85
           DL GAD +  +L   NL GA L+G N   A L  A LE+A L                GA
Sbjct: 562 DLSGADFTGANLEDANLQGARLAGCNFTQAVLARARLERAVLADCRFDHANLGAALCDGA 621

Query: 86  TLNRASLQQAN------------------------------LRLANFTNARLIAVQGWGL 115
             +RASL+ AN                              LR + +    +I ++   +
Sbjct: 622 DFSRASLRHANCSKTVFRACAMGSAVFEATHVHESVWQRCDLRQSRWLQVAMIKMRFEDV 681

Query: 116 FAQAAQFK----------GADLTGAYLE---FARMSGAKMHGSKLHAADLEMTWLS-KAD 161
             + A F+          G     A LE   F R++G +  G     A L  +     + 
Sbjct: 682 SFEEASFRQMGWIECALVGVSFARATLEGCGFTRLAGNE--GLDFTGATLVSSSFGYHSS 739

Query: 162 LKGADLTDANLQEAKLNDANLADAVLTGARRHYATFQGTNMEGCK 206
           L GA L DA L+   L    LA A L G R     F G ++ G K
Sbjct: 740 LAGAVLRDAVLRHCGLRGVTLAGADLRGVRLEGCDFSGCDLRGAK 784



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 51/152 (33%), Positives = 67/152 (44%), Gaps = 15/152 (9%)

Query: 55  INLAGANLSGANLRHANLDLANLEKADLTGATLNRASL-QQANLRLANFTNARLIAVQGW 113
           ++ A A L G         LA  E  D TGATL  +S    ++L  A   +A L   +  
Sbjct: 701 VSFARATLEGCGFTR----LAGNEGLDFTGATLVSSSFGYHSSLAGAVLRDAVL---RHC 753

Query: 114 GLFAQAAQFKGADLTGAYLEFARMSGAKMHGSKLHA-----ADLEMTWLSKADLKGADLT 168
           GL  +     GADL G  LE    SG  + G+KL       +    T  + A L GAD  
Sbjct: 754 GL--RGVTLAGADLRGVRLEGCDFSGCDLRGAKLDRLVGGESLFIRTDFTGASLAGADFI 811

Query: 169 DANLQEAKLNDANLADAVLTGARRHYATFQGT 200
           D+NL ++ L  A+L DA L  A    A   GT
Sbjct: 812 DSNLSKSDLRLADLHDANLFRADVSQAFIDGT 843



 Score = 41.2 bits (95), Expect = 6e-08
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 9/147 (6%)

Query: 65  ANLRHANLDLANLEKADLTGATLNRASLQQ----ANLRLANFTNARLIAVQGWGLFAQAA 120
           A +R  +L  A+L  A    ++   A L++    A     NF    LI      +    A
Sbjct: 507 AQIRQGHLYTAHLLDAAPPASSFRTAKLRRRLGRAEAGQRNFARMNLIGADLSDMDLSGA 566

Query: 121 QFKGADLTGAYLEFARMSGAKMHGSKLHAADLEMTWLS-----KADLKGADLTDANLQEA 175
            F GA+L  A L+ AR++G     + L  A LE   L+      A+L  A    A+   A
Sbjct: 567 DFTGANLEDANLQGARLAGCNFTQAVLARARLERAVLADCRFDHANLGAALCDGADFSRA 626

Query: 176 KLNDANLADAVLTGARRHYATFQGTNM 202
            L  AN +  V        A F+ T++
Sbjct: 627 SLRHANCSKTVFRACAMGSAVFEATHV 653



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 117 AQAAQFKGADLTGAYLEFARMSGAKMHGSKLHAADLEMTWLSKADLKGADLTDANLQEAK 176
           AQA +   A +   +L  A +  A    S    A L    L +A+    +    NL  A 
Sbjct: 499 AQARERMAAQIRQGHLYTAHLLDAAPPASSFRTAKLRRR-LGRAEAGQRNFARMNLIGAD 557

Query: 177 LNDANLADAVLTGARRHYATFQGTNMEGC 205
           L+D +L+ A  TGA    A  QG  + GC
Sbjct: 558 LSDMDLSGADFTGANLEDANLQGARLAGC 586



 Score = 34.7 bits (78), Expect = 6e-06
 Identities = 20/50 (40%), Positives = 25/50 (50%)

Query: 157 LSKADLKGADLTDANLQEAKLNDANLADAVLTGARRHYATFQGTNMEGCK 206
           LS  DL GAD T ANL++A L  A LA    T A    A  +   +  C+
Sbjct: 558 LSDMDLSGADFTGANLEDANLQGARLAGCNFTQAVLARARLERAVLADCR 607