Pairwise Alignments

Query, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 544 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  196 bits (497), Expect = 3e-54
 Identities = 114/296 (38%), Positives = 180/296 (60%), Gaps = 2/296 (0%)

Query: 427 LQEQVHVAERISQGDLA--VEVRLASEQDQLGLALRRMVDNLNGLVSQVQQSSELINDKA 484
           L E V VA+ ++ GDL   +E R   E   L  AL+ M D+L  +V +V+  ++ I   +
Sbjct: 187 LSEAVKVAQSVAAGDLTSHIEARTTDETGLLLEALKGMNDSLAKIVGEVRIGTDTIATAS 246

Query: 485 GRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEYASEANALSRNSEHSARSGN 544
            ++ + +QDLS+   E AS++ + +A++ ++   ++Q ++ A +AN L+ ++   A  G 
Sbjct: 247 SQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGG 306

Query: 545 ELMVSLKAAMQEINQSGLDITNIIRAIEEIATQTNLLALNAAIEAARAGEHGRGFAVVAD 604
            ++  +   M  IN S   I +II  I+ IA QTN+LALNAA+EAARAGE GRGFAVVA 
Sbjct: 307 SVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAS 366

Query: 605 EVRQLAARSAEAAQRSTRLIQESNARTIKGMEITDDTARALEAIVQGAAQVSQLVDEIAS 664
           EVR LA RSA AA+    LI +S  +  +G +   +  R ++ IV    +V+ ++ EI +
Sbjct: 367 EVRSLAQRSAAAAKEIKTLIGDSVEKVEEGSKQVAEAGRTMDEIVGSVRRVTDIMGEITA 426

Query: 665 ASSQQASGIEQVSQAIGQIDEVVHHNSTNSEQSTQAAQELTQQAQQMIVQVGRFKV 720
           AS +Q SGIEQ++QAI Q+D+V   N+   E+++ AAQ L +QA  ++  V  FK+
Sbjct: 427 ASQEQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLVQSVSIFKL 482



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 41/219 (18%)

Query: 523 SEYASEAN---ALSRNSEHSARS----GNELMVS--LKAAMQEINQSGLDITNIIRAIEE 573
           +EY+ E N   A+S   E+   +    G  L +S  +  A+ ++ +  +++   IRA E 
Sbjct: 92  TEYSLEHNKIVAISHTQENEQATALIRGKSLQLSRDINGALDKLTE--VNVAGAIRAGET 149

Query: 574 IAT---QTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAARSAEAAQRSTRLIQESNAR 630
             T   +  L  L   + +   G       V+A  + ++ +R    A +  + +   +  
Sbjct: 150 ADTVYGEARLWVLGLLLGSVALG------LVLALWIARIVSRPLSEAVKVAQSVAAGDLT 203

Query: 631 TIKGMEITDDTARALEAIVQGAAQVSQLV-------DEIASASSQ--------------Q 669
           +      TD+T   LEA+      ++++V       D IA+ASSQ              Q
Sbjct: 204 SHIEARTTDETGLLLEALKGMNDSLAKIVGEVRIGTDTIATASSQIASGNQDLSSRTEEQ 263

Query: 670 ASGIEQVSQAIGQIDEVVHHNSTNSEQSTQAAQELTQQA 708
           AS +EQ + ++ ++   V  N+ N+ Q+ Q A   ++ A
Sbjct: 264 ASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVA 302