Pairwise Alignments

Query, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 534 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  191 bits (486), Expect = 6e-53
 Identities = 126/358 (35%), Positives = 199/358 (55%), Gaps = 6/358 (1%)

Query: 363 AGVLISLLAVIALWISSRALALPIRKAAQLAGAIQKGDFSQRMAHQSADEVGQLSASLDR 422
           A  L++L   IA W+ +  L       + L GA+  G     +A     +   L  ++ R
Sbjct: 175 AAALLTLGLGIAGWMEAGRLVASAGVHSWLPGALAAGGVGFALAWLGLGQF--LGRTVFR 232

Query: 423 MADSLQEQVHVAERISQGDLA-VEVRLASEQDQLGLALRRMVDNLNGLVSQVQQSSELIN 481
             D   E +HVA  I+ GDLA  E+R   E   L  AL +M  NL  +V+ V  +   + 
Sbjct: 233 PLD---EALHVARAIAGGDLAKFEIRRGDEITGLLRALNQMSANLFAIVADVGTNVAGVM 289

Query: 482 DKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEYASEANALSRNSEHSAR 541
             + ++ + +QDLS+   + AS++ + +A++ ++   ++Q ++ A +AN L+ ++   A 
Sbjct: 290 SASSQIASGNQDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAV 349

Query: 542 SGNELMVSLKAAMQEINQSGLDITNIIRAIEEIATQTNLLALNAAIEAARAGEHGRGFAV 601
            G  ++  +   M  IN S   I +II  I+ IA QTN+LALNAA+EAARAGE G+GFAV
Sbjct: 350 KGGSVVSQVVDTMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKGFAV 409

Query: 602 VADEVRQLAARSAEAAQRSTRLIQESNARTIKGMEITDDTARALEAIVQGAAQVSQLVDE 661
           VA EVR LA RSA AA+    LI +S  +   G +   +  R +E IV    +V+ ++ E
Sbjct: 410 VASEVRSLAQRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMEEIVGSVRRVTDIMGE 469

Query: 662 IASASSQQASGIEQVSQAIGQIDEVVHHNSTNSEQSTQAAQELTQQAQQMIVQVGRFK 719
           I +AS +Q SGIEQ++QAI Q+D+V   N+   E+++  AQ L +QA  ++  V  F+
Sbjct: 470 ITTASQEQTSGIEQINQAIAQMDQVTQQNAALVEEASATAQSLQEQADGLVRAVRVFR 527