Pairwise Alignments

Query, 724 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  261 bits (666), Expect = 1e-73
 Identities = 205/748 (27%), Positives = 359/748 (47%), Gaps = 99/748 (13%)

Query: 6   SIQQRIAITGGLCLLATAGILIGYSVYLASTTQQLVSGRVSQQAQEDALQTLQHLGGKYA 65
           SIQ +I +  GLCLLA   +L+  S+  A  +  LV+   +   ++ A Q LQ      A
Sbjct: 7   SIQWKITLLAGLCLLAIVALLVATSLTQAHRSAALVNQANTAMLEDSARQRLQAHAETQA 66

Query: 66  GEIRSEFTEALEAARGMATTFAVGKSGSTNSGGLQIGRDEVNSILLNVLKSQPDFNGTYS 125
             I+  F +A +   G A    V K    + GG  + R E+       L   PD  G Y 
Sbjct: 67  LRIQRYFMDAYQYGNGFARLVQVLK----DRGGSDL-RAELTRQARASLAGNPDVIGLYL 121

Query: 126 CWEPDAIDGQDFLFTDGQNGNNGQTGRFTPYWTRGADGKIAVQPLVEYDTMDKH--PNGV 183
            ++P+A+D QD  +       + ++GRF+ YW++ + G + ++ + E    D     NG 
Sbjct: 122 VFQPNALDQQDSHYLGQDAMGSNESGRFSLYWSQPSPGTLELEAMPETMLGDTSIGSNGA 181

Query: 184 LKGGWYIGPRETLKESVLGPLPYIVQGKQVWLATLSVPIIVDGRFTGVAGTDYNLDFVQQ 243
            K  W   P++T +  +L P    V G+QV + ++++P++  G+  GV G D  L  +QQ
Sbjct: 182 AKNRWLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANLQQ 241

Query: 244 ISQEVSAKLFDGQGEVAIISDQGLIVAESRFPNLIGQHFQKVLPDGWQTALTSVQKGEEL 303
           +S      LFDGQG+V+I +  GL+   SR  +++G+   K + DG             L
Sbjct: 242 LSVNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVADG-------------L 288

Query: 304 ARLDDNGMVVVFAPIELGRTGKPWSMMLKIDKEIVLAKATELKAEMDAQSARSMLQQIGA 363
            R     +   F PI       PW ++L++ + ++ A A  L   +DA +  + L  +  
Sbjct: 289 LR-----VAHPFTPIP---DTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLTSLLI 340

Query: 364 GVLISLLAVIALWISSRALALPI-RKAAQLAG-AIQKGDFSQRMAHQSADEVGQLSASLD 421
           G+  ++  ++ +W+++R +  PI   AA+L   A  +GD ++R+ +   DE+GQL+   +
Sbjct: 341 GLGTAIAGLLLVWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFN 400

Query: 422 RMADSLQEQVHVAERISQGDLAVEVRLASEQDQLGLALRRMVDNLNGLVSQVQQSSELIN 481
           R  D LQ                                        +++QV+ S +   
Sbjct: 401 RFLDKLQP---------------------------------------VIAQVKGSLQEAR 421

Query: 482 DKAGRVTTLSQDLSNGATESASAVTEISATVNQMAGQIRQTSEYASEANALSRNSEHSAR 541
           + A +   ++   S+G  +    + +++   N+M+      +  AS+A   +R ++ +++
Sbjct: 422 NTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQAARAADQASQ 481

Query: 542 SGNELMVS-----------LKAAMQEI----NQSGLDITNIIRAIEEIATQTNLLALNAA 586
            G +L+ S           +  AM E     ++SG  I +++  I  IA QTNLLALNAA
Sbjct: 482 EGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSG-QIGSVLEVIRTIAEQTNLLALNAA 540

Query: 587 IEAARAGEHGRGFAVVADEVRQLAARSAEAAQRSTRLIQ--ESNARTIKG------MEIT 638
           IEAARAGE GRGFAVVADEVR LA R+  + +   ++I+  +   + + G       +  
Sbjct: 541 IEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAMHAGQRQAQ 600

Query: 639 DDTAR------ALEAIVQGAAQVSQLVDEIASASSQQASGIEQVSQAIGQIDEVVHHNST 692
           D  AR      AL+ I +  A +S +  +IASA+ +Q++  E+V++ +  I +V    + 
Sbjct: 601 DSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIRDVTESLAG 660

Query: 693 NSEQSTQAAQELTQQAQQMIVQVGRFKV 720
            +++S + +Q L + A Q    + +F+V
Sbjct: 661 QADESARISQALNRLANQQQALMEQFRV 688