Pairwise Alignments

Query, 526 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  243 bits (619), Expect = 2e-68
 Identities = 144/345 (41%), Positives = 207/345 (60%), Gaps = 1/345 (0%)

Query: 177 ATLAGLALGGAAAVAAATALL-PLSRLARQARQVGDNPVSQLIYTGRRDEIGQIEFAMKM 235
           ATL  L +G  AAV     +  PL        ++    ++Q +   RRDE+G ++  +  
Sbjct: 293 ATLLALLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIAR 352

Query: 236 LETEAGAMVGRIADSSRQLSDHARDLLGAMHGSTQSAARQQQETDLIATAIQQMSASVQE 295
           + T    ++  I D   Q++  A +L      ++  A  Q+ ETD +ATA+ +M+A+VQE
Sbjct: 353 MGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQE 412

Query: 296 VALNAQRTAEVAARADSEAAKGREVVGRTGSSITRLAADIQQAAEVIHQLENHSQEISRV 355
           VA NA++ +  A  AD EA  G  VVG     I RLA D+ ++ E ++ L+  SQ+I  V
Sbjct: 413 VARNAEQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSV 472

Query: 356 LDVIHGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTSLATTDIQRMIGSL 415
           +DVI  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +T +I+ +I SL
Sbjct: 473 MDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASL 532

Query: 416 QTGAREAVDVMQRSREQAEHSVSHADQAEHSLSGINSRVNEISAMSSQIAAAVDQQSSVG 475
           Q G ++  + MQ SR   + SV  A +A  SL  I S V+ I +M+ QIAAA +QQS+V 
Sbjct: 533 QHGTQQVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVA 592

Query: 476 EEISQSIVSIRGSSDEHVASGLHSQRNATGVALLADGMLELVQQF 520
           EEIS+SI+++R  S++  A+   +  ++  +A L   +  LV QF
Sbjct: 593 EEISRSILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQF 637