Pairwise Alignments

Query, 482 a.a., chromosomal replication initiator protein DnaA from Pseudomonas stutzeri RCH2

Subject, 505 a.a., chromosomal replication initiation protein from Pseudomonas simiae WCS417

 Score =  835 bits (2157), Expect = 0.0
 Identities = 432/505 (85%), Positives = 451/505 (89%), Gaps = 23/505 (4%)

Query: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEGDGEELRVYAPNRFVLDWVNEKYLSRLL 60
           MSVELWQQCVELLR+ELPAQQFNTWIRPLQVE +G+ELRVYAPNRFVLDWVNEKYLSR+L
Sbjct: 1   MSVELWQQCVELLREELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRVL 60

Query: 61  ELLSERSSGLAPALSLLIGSKRTSSA-ALPSAAAARAQPQPTVVSTPAPAAPSPA----- 114
           ELL E  +GLAP LSLLIGSKR+S+  A P+A  A A  Q    + PA +APSPA     
Sbjct: 61  ELLDEHGNGLAPVLSLLIGSKRSSAPRAAPNAPLAAAASQAQAAAAPAVSAPSPAPAPSK 120

Query: 115 ----------------RFEPLSADTSEPEQPRVE-RNVQVEGGLKHTSYLNRTFTFENFV 157
                            F+P++   S+    R E R VQVEG LKHTSYLNRTFTFENFV
Sbjct: 121 SSAQKNAPENEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFV 180

Query: 158 EGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLH 217
           EGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLH
Sbjct: 181 EGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLH 240

Query: 218 SERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGGQ 277
           SERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFA+KERSQEEFFHTFNALLEGGQ
Sbjct: 241 SERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQ 300

Query: 278 QVILTSDRYPKEIDGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAA 337
           QVILTSDRYPKEI+GLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAA
Sbjct: 301 QVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAA 360

Query: 338 FFIAQRIRSNVRELEGALKRVIAHAHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRT 397
           FFIAQRIRSNVRELEGALKRVIAH+HFMGRDITIELIRESLKDLLALQDKLVSVDNIQRT
Sbjct: 361 FFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRT 420

Query: 398 VAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDAFGGRDHTTVLHACR 457
           VAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGD FGGRDHTTVLHACR
Sbjct: 421 VAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACR 480

Query: 458 KIAELRETDADIREDYKNLLRTLTT 482
           KI EL+E+DADIREDYKNLLRTLTT
Sbjct: 481 KINELKESDADIREDYKNLLRTLTT 505