Pairwise Alignments

Query, 482 a.a., chromosomal replication initiator protein DnaA from Pseudomonas stutzeri RCH2

Subject, 228 a.a., DnaA regulatory inactivator Hda from Variovorax sp. OAS795

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 21/203 (10%)

Query: 178 HGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEF 237
           H   P +L+G  G GKTHL+ +V   +  +   A V +LH+               + E 
Sbjct: 44  HSPVPTYLWGESGSGKTHLLESV--RVALREQGASVGWLHA--------------GLLEP 87

Query: 238 KRFYRSVDALLIDDIQFF-AKKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIDGLEER 296
             F     A+L+DD+  + A ++ +   +F    +L  G    ++ +   P     L E 
Sbjct: 88  PEFDERWGAVLLDDVHLYTAVQQHAAFNWFVNAQSLQRG----VVAAGALPPADLPLRED 143

Query: 297 LKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALK 356
           L++R GWG    ++      R A+L + AD   V L  D   F+  R   ++  L   L 
Sbjct: 144 LRTRLGWGHVFHLQVLSESERRAVLRQAADARGVMLSDDVLDFMLHRFSRDLGSLMELLT 203

Query: 357 RVIAHAHFMGRDITIELIRESLK 379
           ++  +A    R ITI LIR  L+
Sbjct: 204 QLDGYALQTQRAITIPLIRSMLE 226