Pairwise Alignments

Query, 482 a.a., chromosomal replication initiator protein DnaA from Pseudomonas stutzeri RCH2

Subject, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

 Score =  818 bits (2112), Expect = 0.0
 Identities = 427/506 (84%), Positives = 447/506 (88%), Gaps = 24/506 (4%)

Query: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEGDGEELRVYAPNRFVLDWVNEKYLSRLL 60
           MSVELWQQCVELLRDELPAQQFNTWIRPLQVE +G+ELRVYAPNRFVLDWVNEKYL RLL
Sbjct: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLL 60

Query: 61  ELLSERSSGLAPALSLLIGSKRTSSAAL----PSAAAARAQPQPTVVSTPAPAAP----S 112
           ELL E  SG+APALSLLIGS+R+S+       P +AA  A    T     APAA     +
Sbjct: 61  ELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPVA 120

Query: 113 PARFEPLSADTSEPE------QPRV----------ERNVQVEGGLKHTSYLNRTFTFENF 156
            A  EP+  +TS  +      +P            +R VQVEG LKHTSYLNRTFTF+ F
Sbjct: 121 VAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDTF 180

Query: 157 VEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYL 216
           VEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYL
Sbjct: 181 VEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYL 240

Query: 217 HSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFAKKERSQEEFFHTFNALLEGG 276
           HSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFA+KERSQEEFFHTFNALLEGG
Sbjct: 241 HSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGG 300

Query: 277 QQVILTSDRYPKEIDGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDA 336
           QQVILTSDRYPKEI+GLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKV+LPHDA
Sbjct: 301 QQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDA 360

Query: 337 AFFIAQRIRSNVRELEGALKRVIAHAHFMGRDITIELIRESLKDLLALQDKLVSVDNIQR 396
           AFFIAQRIRSNVRELEGALKRVIAH+HFMGRDITIELIRESLKDLLALQDKLVSVDNIQR
Sbjct: 361 AFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQR 420

Query: 397 TVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDAFGGRDHTTVLHAC 456
           TVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGD FGGRDHTTVLHAC
Sbjct: 421 TVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHAC 480

Query: 457 RKIAELRETDADIREDYKNLLRTLTT 482
           RKI EL+E+DADIREDYKNLLRTLTT
Sbjct: 481 RKINELKESDADIREDYKNLLRTLTT 506