Pairwise Alignments

Query, 441 a.a., ATPase related to the helicase subunit of the Holliday junction resolvase from Pseudomonas stutzeri RCH2

Subject, 440 a.a., FIG065221: Holliday junction DNA helicase from Pseudomonas fluorescens GW456-L13

 Score =  759 bits (1961), Expect = 0.0
 Identities = 382/440 (86%), Positives = 405/440 (92%)

Query: 1   MDLFSREPVSQPLAARLRAASLDEYVGQEHLLARGKPLREALEQGALHSMVFWGPPGVGK 60
           MDLF   P++QPLAARLRAA+LDEYVGQEH+LARGKPLREALEQGALHSM+FWGPPGVGK
Sbjct: 1   MDLFRSTPIAQPLAARLRAANLDEYVGQEHVLARGKPLREALEQGALHSMIFWGPPGVGK 60

Query: 61  TTLARLLAKVSDAHFETVSAVLAGVKEIRQAVEIAKQQAAQYGRRTILFVDEVHRFNKSQ 120
           TTLARLLA+VSDAHFETVSAVLAGVKEIRQAVEIAKQQAAQYGRRTILFVDEVHRFNKSQ
Sbjct: 61  TTLARLLAEVSDAHFETVSAVLAGVKEIRQAVEIAKQQAAQYGRRTILFVDEVHRFNKSQ 120

Query: 121 QDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVARALSEPK 180
           QDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLV RAL+E +
Sbjct: 121 QDAFLPYVEDGTLIFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVYRALTEER 180

Query: 181 GLGDLQLELPEESFQMLLAAADGDGRRLLNLLENASDLAEQGGTISTDLLQDLLGDSRRR 240
           GLG   L L +E FQMLL+AADGDGRRLLNLLENASDLAE  G I TDLLQ LLGD+RRR
Sbjct: 181 GLGKRNLTLSDEGFQMLLSAADGDGRRLLNLLENASDLAEDNGEIGTDLLQSLLGDTRRR 240

Query: 241 FDKGGEAFYDQISALHKSVRGSNPDAALYWFARMLDGGCDPLYLARRVVRMASEEIGNAD 300
           FDKGGEAFYDQISALHKSVRGSNPD ALYWFARM+DGGCDPLYLARRVVRMASE+IGNAD
Sbjct: 241 FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMIDGGCDPLYLARRVVRMASEDIGNAD 300

Query: 301 PRALPLCLNAWDVQERLGSPEGELAVAQAIVYLACAPKSNAVYTAFKAAMRDAAENGSQE 360
           PRAL LCL AW+VQERLGSPEGELAVAQAI YLACAPKSNAVY  FK A+R AAE+GS E
Sbjct: 301 PRALSLCLAAWEVQERLGSPEGELAVAQAITYLACAPKSNAVYMGFKTALRAAAEHGSLE 360

Query: 361 VPLHLRNAPTKLMKELGYGNEYRYAHDEPDAYAAGEDYFPEAMEPRRYYHPAPRGLESKI 420
           VPLHLRNAPTKLMK+LGYG+EYRYAHDEPDAYAAGEDYFPE ++P  +Y P PRGLE KI
Sbjct: 361 VPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPEELDPIPFYQPVPRGLELKI 420

Query: 421 RDKLEHLARLDRESPIQRRK 440
            +KL HLA+LDR SP QRRK
Sbjct: 421 GEKLNHLAKLDRLSPRQRRK 440