Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit clpA from Pseudomonas stutzeri RCH2

Subject, 836 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

 Score =  884 bits (2285), Expect = 0.0
 Identities = 443/748 (59%), Positives = 575/748 (76%), Gaps = 16/748 (2%)

Query: 6   LEVTLNLAFKEARTKRHEFMTVEHLLLALLDNEAAATVLRACGASLDKLRHDLQEFIDST 65
           LE  L+ A   A  + HE+ T+EHLLLAL+D+  AA V+ AC   LD LR  + +++D+ 
Sbjct: 8   LEKALHQALTFANERHHEYATLEHLLLALIDDADAAAVMAACNVDLDALRKTVSDYVDNE 67

Query: 66  -TPLIPQHDEERETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQAVFLL 124
            T L+  +DE+  ++PT GFQRV+QRAV HVQSSG+ EVTGANVLVAIF+E+ES A + L
Sbjct: 68  LTNLVTGYDED--SKPTSGFQRVIQRAVIHVQSSGREEVTGANVLVAIFAERESHAAYFL 125

Query: 125 KQQNVARIDVVNYIAHGISKVPGN--------AGSPESDAEMQ----DEDGGESGASSNP 172
           ++Q + R D VNYI+HGI K PG         A  PES+++      +EDG  +    + 
Sbjct: 126 QEQEMTRYDAVNYISHGIGKRPGTSQTRAPRGADEPESESKPSRGNPEEDGSSAKKQQDA 185

Query: 173 LDAYASNLNELARQGRIDPLVGRENEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLA 232
           L AY  NLN+ AR G+IDPL+GR +EV R  QIL RR KNNPL VG+ GVGKTAIAEGLA
Sbjct: 186 LKAYCVNLNDKARNGKIDPLIGRHDEVNRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLA 245

Query: 233 KRIVDNQVPDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPHAILFIDEIH 292
           KRIV+ +VP+ LA+  ++SLD+G LLAGT+YRGDFE+R K ++ EL + P A+LFIDEIH
Sbjct: 246 KRIVEGKVPEALANDTIFSLDMGTLLAGTRYRGDFEERLKQVVKELEEFPGAVLFIDEIH 305

Query: 293 TIIGAGAASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSE 352
           T+IGAGA SGG MDASNLLKP LSSG IRCIGSTT++E+R  FEKDRAL RRFQK+DV+E
Sbjct: 306 TVIGAGATSGGAMDASNLLKPALSSGAIRCIGSTTYKEYRQFFEKDRALVRRFQKIDVNE 365

Query: 353 PSVEDTIGILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAY 412
           PS++D I I++GLK  FE +HH+ YS+EA++AA EL++RYI+DR +PDKAIDVIDE GA 
Sbjct: 366 PSIDDAIAIMKGLKPYFEDYHHLRYSNEAIKAAVELSARYISDRKLPDKAIDVIDETGAA 425

Query: 413 QRLQPEDQRVKCIDVEQVEDIVAKIARIPPKHVSSSDKELLRNLERDLKLTVFGQDDAID 472
           Q L P  +R K I   ++E  +A +ARIPPK VS  D+ +L NLE++L+  V+GQD AI+
Sbjct: 426 QMLLPASKRRKLITEREIEATIATMARIPPKTVSKDDEMVLANLEKELRSVVYGQDIAIE 485

Query: 473 SLATAIKLSRAGLKAPDKPVGSFLFAGPTGVGKTEAARQLARALGVELIRFDMSEYMERH 532
           +LATAIKL+RAGL+ P+KP+GS++F+GPTGVGKTE A+QLA +LGVE++RFDMSEYMERH
Sbjct: 486 ALATAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAASLGVEMLRFDMSEYMERH 545

Query: 533 TVSRLIGAPPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTD 592
           TVSRL+GAPPGYVGFDQGGLLT+ + + PH V+LLDEIEKAHP+++N+LLQVMDHG+LTD
Sbjct: 546 TVSRLLGAPPGYVGFDQGGLLTDGVDQHPHSVVLLDEIEKAHPDIYNILLQVMDHGSLTD 605

Query: 593 NNGRKADFRNVIIIMTTNAGAETAARASIGFTLQDHASDAMEVIKKSFTPEFRNRLDTII 652
           +NG+K DFRNVI+IMTTNAGA   A+++IGF       +  E I + FTPEFRNRLD II
Sbjct: 606 HNGKKIDFRNVILIMTTNAGASEMAKSAIGFGSSRRTGEDEEAINRLFTPEFRNRLDAII 665

Query: 653 QFGRLSHEVIKSIVDKFLIELQAQLEDKHVTLEVSDAARGWLAEHGYDAQMGARPMARLI 712
            F  L   VI  +V KF+++L+ QL +++VT ++ + A  WLAE GYD +MGARP++R+I
Sbjct: 666 PFSPLPTAVIHKVVQKFVMQLETQLSERNVTFDLHEDAISWLAEKGYDEKMGARPLSRVI 725

Query: 713 QDKIKRPLAEEILFGELAEHGGVVHIDI 740
           Q+ IK+PLA EILFG+L + GGVV + +
Sbjct: 726 QEHIKKPLANEILFGKL-KKGGVVSVTV 752