Pairwise Alignments

Query, 726 a.a., Predicted N6-adenine-specific DNA methylase from Pseudomonas stutzeri RCH2

Subject, 702 a.a., bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL from Escherichia coli ECRC100

 Score =  629 bits (1623), Expect = 0.0
 Identities = 348/724 (48%), Positives = 442/724 (61%), Gaps = 27/724 (3%)

Query: 5   HELILTCPKGLEGLLLEEATALGLEEAREQTSAIRGFGALEIAYRLCLWSRLANRVLLVI 64
           + L  +  +GLE LL  E   LG  E +     +   G   + Y+  +WSRLA+R++L +
Sbjct: 2   NSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPL 61

Query: 65  SRFPTVDAETLYQGVHAVDWADHLQPAGSLAVEFSGRGSGIDNTHFGALKVKDAIVDRLR 124
                     LY GV A++W +   P  + AV FSG    I N+ +GA+KVKDAIVD   
Sbjct: 62  GECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFT 121

Query: 125 TASGERPSIDKLDPDLRVHLRLDKGQAVLSLDLSGHSLHQRGYRLQQGAAPLKENLAAAI 184
             +  RP++D+  PD+RV++ L K  A ++LDLSG  LH RGYR + G AP+KE LAAAI
Sbjct: 122 RKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAI 181

Query: 185 LIRAGWPRIAAAGGALTDPMCGVGTFLVEGAMMAADIAPNLKRERWGFSAWLGHVPAIWT 244
           ++R+GW      G  L DPMCG GT L+E AM+A D AP L R RWGFS W  H  AIW 
Sbjct: 182 VMRSGWQ----PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQ 237

Query: 245 RLHAEAVARAETGLAKPPLWIRGYEADPRLIQPGRNNIERAGLASWIKVYQGDVGDFEPR 304
            + AEA  RA  GLA+      G ++D R+IQ  R N   AG+   I     DV      
Sbjct: 238 EVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP 297

Query: 305 PDQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACLGWEAAVFTAAPDLGKRMGI 364
             +   G V+ NPPYGERL  E +L+ L+  LG  ++    GW  ++F+A+PDL   + +
Sbjct: 298 LPKEPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQL 357

Query: 365 RSHKQYAFWNGALPCKLLLIKVELDQFVTGQRGAASEESTQQQAPVEQARLSEGGQMFAN 424
           R+ KQY   NG L C               Q+     EST    P   A      + +AN
Sbjct: 358 RADKQYKAKNGPLDCV--------------QKNYHVAESTPDSKPAMVA------EDYAN 397

Query: 425 RLQKNLRQLGKWARREGIECYRLYDADMPEYALAIDLYRDWVHVQEYAPPRSIDPDKAQA 484
           RL+KNL++  KWAR+EGIECYRLYDAD+PEY +A+D Y DWV VQEYAPP++ID  KA+ 
Sbjct: 398 RLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQ 457

Query: 485 RLLDALAAIPQALGIAREKVVVKRRERQSGTRQYERQATQGEFLEVAEGGVKLLVNLTDY 544
           RL D +AA    LGIA  K+V+K RERQ G  QY++   +GEFLEV E    L VNLTDY
Sbjct: 458 RLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDY 517

Query: 545 LDTGLFLDHRPLRLRIQREAAGKRFLNLFCYTATATVHAAKGGARSTTSVDLSKTYLDWA 604
           LDTGLFLDHR  R  + + + GK FLNLF YT +ATVHA  GGARSTT+VD+S+TYL+WA
Sbjct: 518 LDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWA 577

Query: 605 RRNLALNGLSDR-QRLEQGDVMAWLEEDRGEYDLIFIDPPTFSNSKRMEGVFDVQRDHLA 663
            RNL LNGL+ R  RL Q D +AWL E   ++DLIFIDPPTFSNSKRME  FDVQRDHLA
Sbjct: 578 ERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLA 637

Query: 664 LLDLAMARLAAGGTLYFSNNFRKFVLDA-GLSD-RYAVEEITASTLDEDFRRNPRIHRAW 721
           L+      L AGGT+ FSNN R F +D  GL+      +EIT  TL +DF RN +IH  W
Sbjct: 638 LMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCW 697

Query: 722 KLQA 725
            + A
Sbjct: 698 LITA 701