Pairwise Alignments

Query, 595 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

Subject, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

 Score =  664 bits (1713), Expect = 0.0
 Identities = 345/591 (58%), Positives = 438/591 (74%), Gaps = 3/591 (0%)

Query: 5   MKLRTRLFLGFSALMTVALLGLLLALVSVMQMAKSQEQLIRNNFSIIEINQQLRQALGNH 64
           MKLRTRLFL  S L+TVALLGLLL LVS++QMA  Q++L+R+    +E+  +LRQ LG  
Sbjct: 6   MKLRTRLFLSISTLVTVALLGLLLGLVSMLQMATVQQRLVRDTTHALEVGLKLRQNLGEQ 65

Query: 65  LIVMLAEDHNLDALDAVRQTFQQTLERGIAEASDDTDRQAFQAVASAYARFIEELDAARH 124
           L+++L ED   ++L  ++  FQ  L +G+ +  +   R  F   +S Y  F++    +  
Sbjct: 66  LMLILDEDTAPESLRLLQDNFQDLLNQGLEQGGE---RTGFSKASSNYQAFLQTYRDSAT 122

Query: 125 QSWTLLEDNSLSQAFNQVRSLMSDMQRAAYDKIRDTELRSRDRASLLAGLLGLTAIAVLL 184
            + ++  D  L  AFNQVR+ + D  + A D I  +E R+RDRA L++G+LGL  + VL+
Sbjct: 123 PARSMGVDQPLGAAFNQVRTDLIDSHKQALDLITRSEERTRDRALLVSGVLGLMGLVVLV 182

Query: 185 IGFITAHSFARRFGEPIERLSAAADQIGRGDFNISLPTPPIAELSSLSRRFGLMAQALHE 244
           +GFITAH+ ARRFG+PIE L+ AADQ+G+G+F+++LP    AEL+ L+RRFGLMA AL +
Sbjct: 183 LGFITAHNIARRFGQPIEALAKAADQLGKGNFDVTLPVTQAAELNQLTRRFGLMADALRK 242

Query: 245 FKQTNVEALVNGQQRLQALLDSIDDGLLIIDRDGRLEHANPVAQRQLAWENEHLGSTLGE 304
            + TNV+ L+ GQQRLQA+LDSIDDGLLIIDR GRLEH NPVAQRQL W +  LGS+L E
Sbjct: 243 HQATNVDELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGWNDSRLGSSLVE 302

Query: 305 ALGHPELDNAARQVLDDKSLSDPPEDLIIEADGERRLLAWRISPVSHHDGSISGAVMVLH 364
           AL  PEL+   RQVL   SL  PP+DL +E D E RLL + ++PVSH  G I GAVMVLH
Sbjct: 303 ALQRPELEQQLRQVLRGGSLDRPPDDLNMEVDEESRLLTYSLTPVSHPQGPILGAVMVLH 362

Query: 365 DVTDQRTFERVRNEFVLRASHELRTPVTGMQMAFSLLRERLRYPAGSRESDLFDTVHEEM 424
           DVT+QR FERVR+EFVLRASHELRTPVTGM MAF LLRER+++P  +RE+DL +T+ EEM
Sbjct: 363 DVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGLLRERVKFPPEARENDLLETIGEEM 422

Query: 425 QRLVRLINDLLNFSRYQSGQQKLELEQCDIPELLEAARQRFEVAANEQDVQLKLELQQPL 484
           QRL +LINDLLNFSRYQSG QKLEL  C I +LL+ A+ RF   A  + ++L  EL  PL
Sbjct: 423 QRLTQLINDLLNFSRYQSGLQKLELAPCAIDDLLDHAQSRFAEQAAHKQIELIKELDPPL 482

Query: 485 PTLMLDRQQIERVMDNLLSNALRHTPKGGEVRLLARHHGERMILSVEDNGEGIPYSQQAR 544
           P +  D  Q++RV+DNLL NA+RHT  GG +RL AR H ER+I+SVEDNGEGI Y QQAR
Sbjct: 483 PRIQADVAQLDRVLDNLLHNAIRHTANGGRIRLHARRHAERVIISVEDNGEGISYGQQAR 542

Query: 545 IFEPFVQIGRRRGGAGLGLALCKEIAQLHGGRIGVHSRIGHGTIFYVALPI 595
           IFEPFVQ+GR++GGAGLGLALCKEI QLHGGR+GV SR G GT FY+ALP+
Sbjct: 543 IFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVFSRPGQGTQFYMALPV 593