Pairwise Alignments

Query, 632 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

Subject, 684 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score =  595 bits (1533), Expect = e-174
 Identities = 339/684 (49%), Positives = 435/684 (63%), Gaps = 52/684 (7%)

Query: 1   MSEEAERWKEKYLQLVERQDQLEARWEQRVDLLRRSLVRSSLAVEGADPAVERCLHAMRE 60
           MS++A+RWKEKYL+ +E+Q++LE RW  R+DLLRR LVRS+LA EG D AV++C+  MR+
Sbjct: 1   MSDDAQRWKEKYLKSIEQQEKLERRWAARLDLLRRGLVRSTLAAEGTDRAVDQCMKEMRD 60

Query: 61  VLREGDLDDGLSQLVPRLEKAVLDSERYRQERAVRLTEALHRLVAQLLALSPPPELRKPI 120
           V+R  D+D  L+ L+PRLEKAVLDSE+ R+ R  +++ AL  LV QL  L  P E+ +P+
Sbjct: 61  VVRTDDMDAALAALLPRLEKAVLDSEQRRETRVDQISTALTALVTQLQKLPLPREVARPL 120

Query: 121 KRFAKQLDQRAAQLRELPGLLGELSVLQGQVLTLQE---DAAPQQGGFLKRLFGGRDSQL 177
           K FAKQLD R +Q RE+P LL ELS LQGQ L   E   D A    G L+RLFG +D   
Sbjct: 121 KTFAKQLDGRVSQAREIPLLLSELSGLQGQALNNLEPDGDTARSGPGLLQRLFGSKDVAN 180

Query: 178 AAIPLE-TAIPAGLSAPAEVTLA-------AEAVVGGETAVASAATEAVVAVV---APIL 226
             +  E T  PA   AP +   A       +E +     A      E V  V+   API 
Sbjct: 181 EVVANEPTPRPAPQPAPTKPAAAEAQPPEQSEELKQALRAFTPQPQETVAPVIEHAAPIK 240

Query: 227 AEPANDEQQAVE----------PVSSAAEPDADAVEAGADADADA--------------- 261
              A+ E    E          PV+         VEA A   A A               
Sbjct: 241 VAEASSETFVYEAPPRSAPIETPVARVEPEPEPQVEAPAPESALAAFIETPEIQVETPDE 300

Query: 262 ------ELAPVAEPLPPE-------SAYALPDSPEPAFSVVADRVEATLSNLLDNLHLPE 308
                  L PV E   P+         YALPDSPEP++S VA  +E TL  LL+ L LPE
Sbjct: 301 TAIGSLSLPPVLEVEEPDPDELQADGTYALPDSPEPSYSSVAKHIEDTLLGLLEELSLPE 360

Query: 309 QHQPQLQTLRARIQHGLNWYELVPVLDDLAMLMIAFSDQGQRDFESYLQTLNERLSAMQE 368
           +H+PQ + +R R+ HGLNWYEL+P+LDDLA+LM+A +D GQ +FE+YL+ LNERL A Q 
Sbjct: 361 RHRPQAEAMRERLAHGLNWYELLPILDDLAVLMLAITDSGQHEFEAYLKQLNERLEAFQG 420

Query: 369 NLLAAHQGHSEGRDAAQALDEELREQVGGLQHSMRQATDLTSLKKVVEARLDGLLDTVDT 428
           +L  A  GH++ R AA+ LD ++REQV GLQ S++ A DL SLK V+E+ L+GLL T+D 
Sbjct: 421 HLQVASDGHADSRSAARELDTQIREQVDGLQSSVQGAADLDSLKHVLESHLEGLLGTMDE 480

Query: 429 YRQQRSQQEQKLGERLQQLVSRVGSLEQAARGLRGHLEEQRQKALQDPLTGLPNRAAWNE 488
           ++QQR Q+EQ+   RL+ L  RV ++EQ A+G R HLE QRQKAL DPLTGLPNRAAW+E
Sbjct: 481 HQQQRDQREQETAARLKGLAERVANMEQEAQGYREHLEVQRQKALIDPLTGLPNRAAWSE 540

Query: 489 RLDLEFARWQRYGGDLLLAVLDVDHFKRVNDGYGHLAGDRVLKIIGSELRKRLRKTDFIA 548
           RLD E   W + G  L LA+LD+DHFKR+NDGYGHLAGD+VLKII + LRKRLR TDFIA
Sbjct: 541 RLDQEVNTWHQRGDSLSLAMLDLDHFKRINDGYGHLAGDKVLKIIANVLRKRLRSTDFIA 600

Query: 549 RFGGEEFVVLLPNTPYEAGQQLMDALRDSISNCPFHFKGERIVITLSAGLTAFGEDDTTE 608
           RFGGEEFV+L+P++         + LR +I  CPFHFKGE + IT+S G+  F   + ++
Sbjct: 601 RFGGEEFVLLMPDSSLTDALAAGEVLRAAIEACPFHFKGEPVTITVSMGVAQFQPGERSD 660

Query: 609 RAFERADGALYRAKNAGRNRVELA 632
            A +RAD ALYRAK AGRNRV+ A
Sbjct: 661 LALKRADEALYRAKAAGRNRVQPA 684