Pairwise Alignments

Query, 383 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

Subject, 397 a.a., major facilitator superfamily MFS_1 from Variovorax sp. SCN45

 Score =  177 bits (450), Expect = 4e-49
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 3/364 (0%)

Query: 11  SGFYFFYFALLGSTAPFLGLYFDHLGFSPERIGELIAIPMLMRCLAPNLWGWLGDATGRR 70
           +G    YFA +G   P+L L+   LG     I  L ++  + R  AP  WG L D TG+R
Sbjct: 18  AGLSASYFAHIGFFNPYLPLWLKDLGLPIFTISLLASVQSITRVFAPYAWGALSDHTGQR 77

Query: 71  LEIVRLGALCTLLS-FGLIFFDKSFAWLAMVMALHAFFWHAVLPQFEVITLAHLHEQAER 129
           ++++R  A   L S FGL +   ++ WLA+V+ +      +++   E      +     R
Sbjct: 78  VKLLRFSAAVALASSFGLWWHGGAW-WLALVLLVMFTHTSSMMSLTEAAMAQLVAGDWGR 136

Query: 130 YSQVRLWGSIGFILAVVGLGLLFQRLSLDLYPTAVAVVMVGIVLSSFWVPNAHPRQRADV 189
           Y ++RL GS GF+L V   G  F+R  +  +P   A  +  +++++  +P+      A  
Sbjct: 137 YGRIRLCGSAGFLLTVFVAGEWFERFGMKHFPAWAAGTLAIVLIATMKLPDLREPPAAHD 196

Query: 190 AGQGGFLAQLRRPGVLAFYACVALMQLAHGPYYTFFSIHLEALGYSRSFIGLMWALGVVA 249
           A +      LR P V  F+A +    ++H   Y FFS++L+++GYS+S IGL+WAL VVA
Sbjct: 197 AVKAPIGPVLRNPAVRWFFAALFFQVMSHFSVYAFFSLYLDSIGYSKSTIGLLWALSVVA 256

Query: 250 EILLFLGMARLLERFSLRQVLLASFLIAALRWVLLGQFADHLAVLLIAQLMHAATFGSFH 309
           EI+ F    RL+    + + +L   + A  R  L       +  L++AQ +HA +F + H
Sbjct: 257 EIVWFFLQGRLIGLLPMPRWMLVCGIAAVARLGLTAGLGGFVVALIVAQWLHALSFAAHH 316

Query: 310 AAAIHFVQRSFGHRQQGQGQALYASLS-GIGGALGALYAGYAWSGLGPSWSFAIASLAAL 368
              I  V R F  + +G+GQAL+  +  G GG LG L  G      G    FA A+  A+
Sbjct: 317 TTCIAVVSRRFPGQLRGRGQALFTVIGYGFGGVLGVLLGGAVAQAFGYRTMFAAAAALAV 376

Query: 369 AAAV 372
             ++
Sbjct: 377 LGSL 380