Pairwise Alignments

Query, 252 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

Subject, 296 a.a., Transcriptional regulator, AraC family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 53/247 (21%), Positives = 99/247 (40%), Gaps = 12/247 (4%)

Query: 14  HSHDHP-QLVFGLKGLLEFEIGGRVSCVGEQSLAVIPSATHHACASTSGSH-----CLVL 67
           H HD+  +L++  KG+    I   +       + V+     HA AS S S      C + 
Sbjct: 38  HMHDNETELIYVKKGIARLIIDSSLYVAHADDIVVVERGRLHAVASDSNSPATTYTCALY 97

Query: 68  DLPSENWVRENL-GHHAERSLRLLDRPDTPRLAPAQQSLVAWLARSPINDSVIAAQGTAL 126
                 W    L   H+   + ++      +    + S++    ++ +  SV  A    L
Sbjct: 98  GFCFPGWEENQLLQSHSCPVVSVVQGKGVIKSIFNELSVLLPQGKNVLASSVYDAFAYTL 157

Query: 127 LLASLANTDQPPRDRHG-----LPLAAVDAFIDQHLPHPLQVADLARIAGCSVARLHARF 181
                 N     R   G     + +  V  +++ +    + +  L++    SV+ +   F
Sbjct: 158 TALYYENFKNAYRSEQGYIKKDVLIKDVLVYLNNNYREKITLDQLSKKFRASVSYICHEF 217

Query: 182 LHETGKTPMEYVRERRLQHAEALLHDTRLPVGEIAARVGYASQSAFTAALVRVHGRSPRM 241
             E   +P+ YV +RR+  A+  L +T  P+ EI+ RVGY +   F    +R  G SP  
Sbjct: 218 AKEYHISPINYVIQRRMTEAKFALTNTESPLAEISWRVGYENVDHFAKLFMRHVGCSPND 277

Query: 242 LRRELRD 248
            R++ ++
Sbjct: 278 YRKQFKN 284