Pairwise Alignments

Query, 450 a.a., type I secretion membrane fusion protein, HlyD family from Pseudomonas stutzeri RCH2

Subject, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  287 bits (734), Expect = 5e-82
 Identities = 173/417 (41%), Positives = 251/417 (60%), Gaps = 47/417 (11%)

Query: 37  ARLTVWLTALLLAAVLIWANYAVLEEVTTGEGKAIPSSKIQTVQNLEGGIVAQIYVREGQ 96
           A L VW+ A LL A+L WA    L+EV+TG GK +PSS+ Q +Q+LEGGI+  + VREG 
Sbjct: 60  ASLLVWIIAGLLLALLAWAWSFKLDEVSTGSGKVVPSSREQMIQSLEGGILVDLKVREGD 119

Query: 97  VVNKGDTLLRLDNTRFLSNQEETEAERLSLLARVERLAAEAEGRPLALPEEITRDAPQLA 156
           +V++G+ L +LD T+  S  +E+ +   + LA   RL AE  G PLA P E++ DA  L 
Sbjct: 120 IVDEGEVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVGGTPLAFPPEVSSDA-DLV 178

Query: 157 EDERALYESRQQRLRSEQRILKEQLTQKQQEVAEFRSKQQQYRSSLSLIQQELNMSTPLV 216
             E ALY+SR+++L S        +TQ                 +LSL+++EL ++ PLV
Sbjct: 179 RTETALYQSRREQLASSL----SGVTQ-----------------ALSLMRRELALTEPLV 217

Query: 217 ETGAISQVEILRLRRSIVDVRGALDATTLALPRAEAAASEIQSRIEQSELAFRAEAFKDL 276
             GA S VE+LRL+R I +              AE  A++++S+       +  +A +DL
Sbjct: 218 ARGAASDVEVLRLKRQINE--------------AETKAADLKSQ-------YYVKAREDL 256

Query: 277 NAARTLLQKITATSVAIDDRVSRTTVVSPVHGIIKQLRINTIGGVVQPGSDLLEIVPLED 336
             A   ++   + +    D ++R T  SPV GI+K + + T+GGV+ PG  L+ IVPL++
Sbjct: 257 AKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIAVTTVGGVLPPGGKLMVIVPLDE 316

Query: 337 SLLIEAKVRPQDIAFLHPGQKAMVKFSAYDYTIYGGLKANLELISADTITDKDGRS--FY 394
            LL+EA++ P+D+AF+HPGQ+A VK +AYDY I+G L   +  IS DTI D   R   +Y
Sbjct: 317 KLLVEARISPRDVAFIHPGQEAAVKVTAYDYAIFGDLPGKVTTISPDTIQDDVKRDVYYY 376

Query: 395 LIQVRTEKNYL-GSPGHQLVIIPGMVATVDIITGEKSVLDYMLKPILKARHEALRER 450
            + +RT+ ++L    G    I+PGM+ATVDI TG KSVLDY+LKP+ KA  EALRER
Sbjct: 377 RVYIRTDVDHLKNKNGQSFPIVPGMIATVDIRTGSKSVLDYLLKPLNKA-GEALRER 432