Pairwise Alignments

Query, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

Subject, 564 a.a., ATP-binding cassette protein, ChvD family from Pseudomonas stutzeri RCH2

 Score =  342 bits (876), Expect = 3e-98
 Identities = 205/528 (38%), Positives = 309/528 (58%), Gaps = 11/528 (2%)

Query: 18  LLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWRAPGLKIGELPQELPR 77
           +L  +S     G ++ ++G NG GKS++LR++ G  +  DGE    PG+ +G LPQE   
Sbjct: 30  ILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDTEFDGEARAMPGINVGYLPQEPQL 89

Query: 78  ADDRTVFDVVAEGLAGVGELLAEYHHL-SQNIQDEADLEKLMHVQQALEA----KDGWRL 132
             ++TV +VV E +  + +  A    + +   + +AD + L   Q  LEA     DG  L
Sbjct: 90  DPEKTVREVVEEAVGVIKDAQARLDAVYAAYAEPDADFDALAAEQAKLEAILQASDGHNL 149

Query: 133 QQLVDSTLSRLQLPA-DRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTNHLDIGAIAW 191
           ++ ++     L+LPA D  +A LSGG +RRV L + L+S PD+LLLDEPTNHLD  ++AW
Sbjct: 150 ERQLEVAADALRLPAWDAKVAHLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAW 209

Query: 192 LEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGDYASFLVHKEQQLAAEET 251
           LE  L  F G V+ ITHDR FL N+A  ILELDRG  I + G+Y+ +L  K  +LA E  
Sbjct: 210 LERFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPYEGNYSGWLEAKSARLAQESK 269

Query: 252 ANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSERRNVQGKATFQVETAEK 311
             +  +K + +E  W+R+G KAR+++++ R++  + ++++  ++R    +    +    +
Sbjct: 270 QQSAHEKAMKEELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRAETNE--IYIPAGPR 327

Query: 312 SGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGTGKTTLLKLLLGELHPSS 371
            G +VI  + VT  + G   LI + S  + +G  +G++G NG GK+TL ++L+G+  P S
Sbjct: 328 LGDKVIEFKNVTKGY-GDRVLIDNLSFSVPKGAIVGVIGGNGAGKSTLFRMLMGKETPDS 386

Query: 372 GSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREFITIDGQNRHVLSYLGDFLFSPQR 431
           GSIE G  +++A  DQ R  LE  KTV + +++G + I I         Y+G F F    
Sbjct: 387 GSIEIGDTVQLACVDQSRDDLEGGKTVWEAVSDGLDQIRIGNYEVPSRGYVGRFNFKGAD 446

Query: 432 ARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLLGFQGTVLMV 491
            +  VK LSGGER RL LA    + AN+L+LDEP+NDLDVETL  LEE LL F G+ +++
Sbjct: 447 QQKFVKDLSGGERGRLHLALTLKQGANVLLLDEPSNDLDVETLRSLEEALLDFPGSAIVI 506

Query: 492 SHDRAFLDNVVTSTLVFQGGGEVREYVGGYQDWLRQGGSPRLLGVAES 539
           SHDR FLD V T  L ++  G V  + G Y ++  +    R LG A S
Sbjct: 507 SHDRWFLDRVATHILSYEDDGGVVFFEGNYTEY--EADRKRRLGDAAS 552



 Score =  103 bits (256), Expect = 3e-26
 Identities = 78/263 (29%), Positives = 132/263 (50%), Gaps = 33/263 (12%)

Query: 3   LLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEIWR 62
           +++F +V+  YG   L+D +S+ + +G  V +IG NG GKS++ R++ G  + D G I  
Sbjct: 332 VIEFKNVTKGYGDRVLIDNLSFSVPKGAIVGVIGGNGAGKSTLFRMLMGKETPDSGSIEI 391

Query: 63  APGLKIGELPQELPRAD-DRTVFDVVAEGLAGVGELLAEYHHLSQNIQDEADLEKLMHVQ 121
              +++  + Q     +  +TV++ V++GL  +   +  Y   S+      + +      
Sbjct: 392 GDTVQLACVDQSRDDLEGGKTVWEAVSDGLDQI--RIGNYEVPSRGYVGRFNFK------ 443

Query: 122 QALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDLLLLDEPT 181
                  G   Q+ V                +LSGG R R+ LA  L    ++LLLDEP+
Sbjct: 444 -------GADQQKFV---------------KDLSGGERGRLHLALTLKQGANVLLLDEPS 481

Query: 182 NHLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILEL-DRGHLIDWNGDYASFLV 240
           N LD+  +  LEEAL  F G+ + I+HDR FL  +AT IL   D G ++ + G+Y  +  
Sbjct: 482 NDLDVETLRSLEEALLDFPGSAIVISHDRWFLDRVATHILSYEDDGGVVFFEGNYTEYEA 541

Query: 241 HKEQQLA-AEETANALFDKKLAQ 262
            ++++L  A    + +  KKLAQ
Sbjct: 542 DRKRRLGDAASQPHRVRYKKLAQ 564